Detailed information on CNT30609586


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30526301Gossypium raimondiiPhaseolus vulgaris6.5720.0484.91106forward

Expression of CNT30609586

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MYLFFFPGGESLKCCKSVSVVVLVEFISFCQGS*

>peptide 2 (47 aa)
MILPGLFSIFIYISFACSAAEKGNKVINNNIFVPCKLYFNLVILLSL*

>peptide 3 (46 aa)
KQTKNSSLIFKHFLVFSYTKLGMYVYLKRSIRGTVLVSILQQAFFL*

>peptide 4 (39 aa)
MLEALSAHSLSVIHFSLSFFTILCMHEPVYARVFVFILA*

>peptide 5 (38 aa)
MIHEHEHNVSRRDSWFLICQLLYEKPTAHHSRNTLSYA*

>peptide 6 (42 aa)
MQTTIQLKHYCLQFSWLFGFSLMLTLYIMNRVLLIASKLDLT*

>peptide 7 (41 aa)
MTNHSYGIGVYLACTFFSQKPKPKKFRSSCKSLTRCKQQFN*

>peptide 8 (31 aa)
MQLHGGVESEEGSDFGCSVKCLINTYYMMFL*

>peptide 9 (59 aa)
MGLECTWPALFSVKNQNLKSSVVLVNHSPDANNNSIKTLLFAIFMVIWFQSHAYPIYHE*

Sequence

>CNT30609586
AAGCAAACCAAAAACAGTAGTCTCATATTCAAACATTTCTTGGTATTTTCCTATACCAAGCTAGGGATGTATGTATACCTAAAGAGATCCATAAGGGGTA
CTGTCCTTGTTTCCATTCTTCAACAAGCATTCTTTTTGTAATAATCTGTCTGCTATAAAAAAGAAAAGGGGGTTTTAGGGTAAGGGAGGTGACAGAAGAG
AGTGAGCACCCAGGGTGTTCTCTTGCATGCTTGGGCTTTCATGCTTGAAGCTTTGAGTGCTCACTCTCTATCTGTCATCCACTTCTCTCTCTCTTTCTTT
ACAATTTTATGTATGCATGAACCTGTATATGCAAGGGTTTTTGTGTTTATTTTAGCATGAATTTGATACCCAGCATAGAATCTACTTTGTACTAACTCTT
TCATTGTGTCAAAGGAGAAAAGAGTCAATGACAAATCATTCTTATGGGATTGGAGTGTACTTGGCCTGCACTTTTTTCAGTCAAAAACCAAAACCTAAAA
AGTTCCGTAGTTCTTGTAAATCACTCACCAGATGCAAACAACAATTCAATTAAAACACTATTGTTTGCAATTTTCATGGTTATTTGGTTTCAGTCTCATG
CTTACCCTATATATCATGAATAGGGTCTTATTAATTGCGTCTAAACTAGATCTAACTTAGGTTTTAACTTAATACATGTTTCTCTATTTTGCTTGCATTA
TTTATTTATTTTTTCAATGAATTGATCTAGCTAGGTAGCATATAATCATGAACATCAGTGTTAGTATATATCATGTAAACTATATGATTCTATTATGTTA
GTTAGCTTGTTTATGTGAAGATGCAGTTGCATGGTGGAGTGGAGAGTGAAGAAGGATCAGATTTTGGCTGTTCAGTCAAGTGTTTAATTAATACATATTA
CATGATGTTTTTGTAAAATGATTTTTTAAGTTTATATAAGGTATAGCTAAAGTTTCTTTGTCTTTCCCTCCGCTTTATGATCTTACTTGCTGCTAATATA
TATATATATGGGAATGAATCTCTTCCATAACTTGTGTAATCAGATCTATAGATATCACACACAGTAGCATACGTACATACAACCAAAATCTCCAAGCTAA
TGATCCATGAACATGAGCACAATGTTTCAAGGAGAGATAGCTGGTTCTTAATTTGTCAACTCTTATATGAAAAGCCAACTGCTCATCATAGCAGAAACAC
CTTGAGTTATGCATAAAGATTAACATATTATGTTCAACTTCAGCATAGACACAGAAGATGGAAGTTTCTCAAGTATACCTAAAACCAAGGAGGAAGAAGA
TTAGTTTCCATTTCTTTTAAATGTATCTATTTTTTTTTCCTGGTGGGGAGAGCTTGAAATGCTGTAAAAGTGTTTCAGTTGTGGTCCTTGTGGAGTTCAT
TTCATTCTGTCAAGGTTCATGATTTTACCTGGCCTATTCAGTATATTTATATATATTTCCTTTGCATGCTCAGCTGCAGAAAAGGGAAACAAAGTAATTA
ATAATAATATCTTTGTTCCATGTAAGTTGTATTTTAATTTAGTTATATTACTCTCCCTTTGATCTGTAATTGGTGTTCTTTGGTGAAGCAAATCTAATGA
AAGTAAAAGATCCC