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Detailed information on CNT30605197


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30548225Gossypium raimondiiIpomoea triloba29.3319.7987.3244forward
CNT30378677Gossypium raimondiiArabidopsis thaliana30.899.3893.39257forward
CNT30709047Gossypium raimondiiGlycine max42.7934.2690.45356forward
CNT30183238Gossypium raimondiiSecale cereale17.5523.486.3146forward
CNT3088309Gossypium raimondiiVigna radiata20.1920.9291.67168forward
CNT30229163Gossypium raimondiiAnanas comosus7.3328.3790.1661forward

Expression of CNT30605197

Peptides detected in this lncRNA

>peptide 1 (86 aa)
KNIYIVPFFIFEGWRGYTAKEAPKGSSWVTEESSDCSVTEEERFLPLSLLSSTLGLIILLQQSKQRNESNGNLDLCLLGRFFFPLR*

Sequence

>CNT30605197
GTAAGAATATATATATAGTACCCTTCTTTATTTTCGAAGGATGGAGGGGGTATACAGCGAAAGAAGCGCCGAAGGGGTCATCCTGGGTTACTGAAGAGTC
GTCCGACTGCTCGGTGACCGAAGAAGAGAGGTTTTTACCGCTTTCTCTTCTCTCCAGCACTCTCGGACTAATCATCTTGCTGCAACAAAGCAAGCAACGG
AATGAATCTAATGGAAATTTAGATCTCTGTCTGCTTGGAAGATTCTTCTTTCCTCTTCGGTGAAAGAGGGCAAGGGTGTGTGGGAGCTAAGCTAAAAGGG
GAGAAGATCTCGTCCACCAAGCGGGAACAGAGTGCGACCCCTAAGCAATTGGAGGTTCTCGCTCATCTCTTGGGGGTCCACATATCATCTGAAAACTTGT
CCTGTTCCATTAGCATAGCTAAATTTGAATAGGATGACTCAGCGTCAGGAAAAGTAAGCCCCCCTTTGCCTTGATTGAATTTGGCTTCGCTGCGCCCTGA
ATCAATCAAAAAGCTTATTGATTTGATTCATCCCATTTCATTTGGGCGAGAGGGAGGCTGTGAGTCACCTGGGCTACGGATTTGTCGGTTGGTTGATTCT
CGAAATCACCTCTTGATAAAAAAAAGGGGGAAAAGAGGGGTGGGCTTTGTTCTGGGGGGGGGCCGCCTTTCGCAGCTTTAGAAAGGAGAGAATTGTTGAA
AGTCACTCTCTCCAACCTTTTCTATCTATCTTTAGAAGTAGGGCGAGAGAAAGTCAATATGATATTTGCGTTGGTTTTTCCAACGAAACTAAGCACTTTT
TTGTTTTTTTCATTCGGAAGGCTCAGTCCCAC