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Detailed information on CNT30603743

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30115945	Oryza punctata	Oryza nivara	50.44	24.02	96.86	287	forward

Expression of CNT30603743

Peptides detected in this lncRNA

>peptide 1 (40 aa)
LVSTVTSECNQASRINLLVSSLLTTRVQPCTATDKITKFS*

>peptide 2 (65 aa)
MAHGSPIFFWLAALASLLARFCTGSRAEGDDDDGPAAAGDHGPTPRQMASDSAKHFSSAHKIKFC*

>peptide 3 (33 aa)
MKNDRAGQGLQFPVPHVPVPLAMKATTHPESPKL

Sequence

>CNT30603743
CTTGTAAGCACGGTAACTAGCGAGTGTAATCAAGCATCCAGAATCAATCTGCTGGTCAGTTCACTACTTACTACTAGAGTCCAGCCTTGCACAGCCACAG
ATAAAATCACTAAATTCAGCTAGTTTATATCTGAATCGTAGGAGGTGATGGCACACGGATCACCCATCTTCTTCTGGCTGGCGGCGTTGGCGTCTTTGTT
GGCGCGTTTCTGCACGGGTTCCCGCGCCGAGGGTGACGACGACGACGGACCGGCCGCCGCCGGCGACCACGGCCCGACGCCGCGGCAGATGGCTTCGGAT
TCTGCCAAACACTTCTCCAGTGCTCACAAGATAAAGTTTTGCTAGAATCGTCTAACAGTTTTGTTTATTGAATCTTTTTACCCTAATACAATAACTGCTT
CAACAGCTTGATTGTCCTGGTTGGTCTATCTGAACTACCCTGCATGAGAGGCCAAGTGTAAATCTATGAAAAATGATAGGGCCGGCCAAGGCCTTCAATT
CCCGGTGCCTCACGTGCCGGTACCCTTGGCCATGAAGGCGACAACTCACCCCGAAAGCCCCAAACTCAC