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Detailed information on CNT30603504


BLAST search results

BLAST vs Swiss-Prot:
sp|A2WLS0|MT3A_ORYSI, E-value = 6e-08

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30106235Oryza punctataOryza longistaminata6.1528.2396.6159reverse complement

Expression of CNT30603504

Peptides detected in this lncRNA

>peptide 1 (79 aa)
MRSTGSIVSYICVFERKEKVQNSDEKYASLIVGLPLLGFNYDDAIAGSFLPANYNHHVNRINRSIDQFAKLKEIKVERN*

Sequence

>CNT30603504
CATACGTTGATACACGCAGAGTCGCCGAAACGACCAGCTTAATTAACTAATCGATACTACACGGGTTTAATTCAGCAATAATCAGCGCACACACAAACCA
CGCATATGGTGATTTTTATTGTGGACTAATTAAGGTAGGTGGTTGACACGGCCGGCGGCGAGGGCGCAGCTGGTGCCGCACTTGCAGCCGTCGTTCTCCT
CGCCGGCGGCGACCTCCTCGAAGTGGCTGCACCCACGCACAAGCAAGCAAATAATTAAGCCGTCAGGTAAAAATTGCTCCATGAGAATGATTCTCATATG
AATTTGTAAACAAAGTTTTCTTTTAAAATGTTTTCAATGATTTTTTTCTAGGACGAGAGTTATAACTTTTTCGCGAACACACGGAAGAATTACACGTTAA
TATATTTGATGAAGTAGAGTATTAAAGTTACACAACGCAATGGCTGGAGGCTATTGCCGGAGGAAAGACAAGGGTAACAAAAGGAAAAAAAAACACTAAA
AAGGAAAAAGAAAAACTAAGCTACGTTGTGTCTCTTATGCGATCGACAGGATCAATCGTATCGTATATATGCGTGTTTGAGAGGAAAGAAAAAGTGCAAA
ATTCAGACGAGAAATATGCTTCGTTGATCGTTGGTTTACCTCTTCTGGGCTTCAACTATGACGACGCCATAGCTGGTTCCTTTCTTCCTGCAAATTATAA
TCACCACGTCAATCGAATCAATCGATCGATCGATCAGTTCGCAAAACTGAAAGAAATTAAGGTCGAAAGAAACTAATTAACCGATGATCTAGAGTAGGCA
GCTAGTAGCTCGTAGTACTTACACGCACTGGCTCTTGTCAGCGCAGTCGCAGTTGCCGCACTTGTCCGACATGGTCGAAGATTTAGCCAATCGAGTGATG
AATTAATTCCTTGTGTTGCTTATGAGCTTCTTGTGCTTATTAGCTAGCTCTGGTGGTGA