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Detailed information on CNT30598722


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30379963Fraxinus excelsiorManihot esculenta5.3335.9691.7873forward
CNT30507162Fraxinus excelsiorNicotiana attenuata6.0639.3486.7583forward
CNT30509056Fraxinus excelsiorSolanum lycopersicum5.413790.5474forward

Expression of CNT30598722

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MFVEGKRVMDFELNSDVFNTSGHFRVFFVSMDRSDFYLALSRASCVYFFIFIFIICFF*

>peptide 2 (43 aa)
AVDPIFYRFSYPSPFIYRPLTPLSFILSSPFRVFFVPTAMDRL*

>peptide 3 (30 aa)
CRPNILPFLISQPLYISSTHTFIFHPKFSF*

Sequence

>CNT30598722
GCTGTCGACCCAATATTTTACCGTTTCTCATATCCCAGCCCCTTTATATATCGTCCACTCACACCTTTATCTTTCATCCTAAGTTCTCCTTTTAGGGTTT
TCTTTGTTCCTACAGCCATGGATAGGCTCTAGGTAGTCTTATCTGGGGCTTCTTGTTGGTGGGTTTGTTTCATAATATGTTTGTTGAAGGTAAAAGGGTC
ATGGATTTTGAACTGAATTCTGATGTTTTTAATACTTCAGGGCATTTTAGAGTTTTCTTTGTTTCTATGGATAGGAGTGATTTTTATTTAGCTTTATCTA
GGGCATCTTGTGTGTATTTTTTTATTTTTATTTTCATAATATGTTTCTTTTAGGTTATGAATTTTGCACTTGAATTCTGAAGTCTTTTCGTACTTCAGAT
CTCAGTTGATGCACACGTTCATGGATCTATGAATCCATGGATTTTTCTGCCAAATGTTTTTCTTGATCACTTAGATCTGAAATTCGTGCAATAATAATAG
TACTGCATTGATTTCTCGTTGGTAGAGTTATATGAAGTTGCAAACTTGAACTTGATCAAATCGGTTTTCTTGTGGAGATTATTGTTATGCTGGAAAAGGG
CACTTTGGGGTTGGTGGGGTGGGTTGGGAGGGGAAGTACTGTGGATTGACTGACTTTCTGTGTGTAGTGAGATTAGGGTTTGAGAGTGGAGCTCCTTGAA
GTCCAATAAAGGATCTTGCAGGGAAGATTGAGCTGCTGACCTATGGATTCCTCAGCCTCATCCAAACTTTTTTAAGCCATTTGGATGGTTTTGTGGCTTG
TATATGTCAGGAGCCTGCATTACCCAAGTTAGATCCTTGTTTGGATTGAAGGGAGCTCTACACTTGTACCCTTTTCATTAATTTCCTTTATGGATTTGTT
TGTTCTTGTCTGTTTCTCTTTGAAATTCTCCTTGCGTTTCATAACAAACTGAAGGCTTATTGTAAATTTGGATTTCTCTCTAGATTTTCTTTGCTATTAT
TGGTATCTGGTGGAAACCATTTTTTCTATTCAATTTTCTTCAGGGACTCATGGGACCATTGGAGAAATCTATATACAGCTGCAAATAGATCAGAGACAAG
ACTTCCAAGGAGATATTCTACACAAAAATGAAGAAGGACAGAAAGTAAAAGAATGAAAGATAAAGTTGCACAAAGGAACTACAATTTCAGTTACACGTCT
AGTACATATTGACTTGAGAAATGCAAGGAGAAAAATCATCTTTTTCAAACTTGGAGAGGTCAGGTTGTAATTTTGATTTATAGGCTGCAAGCAAGTTTGC
AGAAGCTATTACAAAACCAAGCTCACCCCAGTTTGAATGTAATGTAGGAATTAATGGGTGAAACATGAG