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Detailed information on CNT30594786


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30184327Eragrostis curvulaSecale cereale3.9723.9490.251forward
CNT30468973Eragrostis curvulaSaccharum spontaneum11.627.8586.58149forward
CNT30338549Eragrostis curvulaEragrostis tef46.4260.287.75596forward
CNT30102896Eragrostis curvulaOryza rufipogon4.5227.189.6658forward

Expression of CNT30594786

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MLDLLSLSLFLNLTFVHFYILLLLYIEREVSS*

>peptide 2 (31 aa)
GTPAIRPAPIFNPADNIRLSRVPDCKSRGCL*

>peptide 3 (31 aa)
MLSVSIDGLCSHNFYTSAYRIQDIKIQPAIR*

>peptide 4 (53 aa)
RGRPRSDRRRFLILQTTFGSPEYPTANPAVAYKLLTLLPLPSVHHRHHLYSRV*

>peptide 5 (36 aa)
MIEDHTCDVLASYAVAASSFLPPFAKASEIKCFQLA*

>peptide 6 (34 aa)
MDTVYSLHGATFNFLTLLVITPCGPKYKFIYAFA*

>peptide 7 (35 aa)
MSLSKCTQTYLRYRQHPIVFFFALNIQNSTLADAV*

Sequence

>CNT30594786
CGGGGACGCCCGCGATCCGACCGGCGCCGATTTTTAATCCTGCAGACAACATTCGGCTCTCCCGAGTACCCGACTGCAAATCCCGCGGTTGCCTATAAAC
TCCTCACGCTCCTTCCCCTTCCTTCCGTCCACCACCGCCACCACCTCTATTCTAGGGTTTAGGGGGAGATCGACCTCGCCGCGGAGCGAGGGAGGGATTC
ATCAGATATGCATATGGAGGCAGCAAGCTAGAGGCGGCAACTGCACAACTTGCAAGAATTTGATGATTGAGGATCATACCTGTGATGTTCTTGCAAGTTA
TGCAGTTGCTGCCTCAAGCTTCCTGCCTCCCTTTGCCAAAGCTAGTGAGATAAAATGCTTTCAGTTAGCATAGATGGACTTTGCAGTCATAATTTCTATA
CTTCAGCATACAGAATTCAAGATATAAAAATACAACCTGCAATCAGATAACATAAGGCTATTTCAAGAAAAAGAAGGATATACGATATCATTTTGTGAGC
TCGCATCTCATATTAAGATATTTTTGGTTTGAAGATGCATAATGTTCAAGACTAATTAAGTACATGGATACTGTTTACTCTTTACATGGTGCCACATTCA
ATTTCTTGACATTGTTAGTTATTACTCCCTGTGGTCCCAAATATAAGTTCATTTATGCTTTTGCATAAGAATAAAGAAAAATGAGCAGTGGCTGTATTGC
CAATGAGTTATTATTATAGTTAAGGTAGATGTAAGTTTGTTGCGTTGATTAAAATGCCTTTAAGCATGGGTATACATGAACAAATGAAGGAAAATGTGCG
TTGGGGTTGTTGATGGTATTGGGTGCTTTTGAAGGAAAGACTTAATGGTCTTACATTTGGGATTGAAGGGAATTAGCTTGATATCCTCGTTTACTTAACT
AAAATAGTTACCTTTCAGTATAACTTGATTTGAATATTCATTATCCCTTTAAACATGCTAGATTTACTCTCTCTCTCTCTTTTTTTGAATCTAACTTTTG
TTCACTTTTATATTCTTCTCCTGTTGTACATAGAACGAGAAGTGTCATCATAACTTGAATGAGCTTGAGTAAATGTACTCAAACTTATTTGAGGTATAGG
CAGCACCCAATAGTTTTTTTTTTTGCTTTAAATATTCAGAACAGCACATTAGCTGATGCTGTCTAAATTTTTCTGTTCCTGCATGGGTTTGGGACCAAGA
TGCGCTGCATTATAGATATTGCACTTAGTTACAAACATTTTGCACCTTTGTTCGACTATTTTTCTTGGCATTTTGTAAAGTTAC