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Detailed information on CNT30594691


BLAST search results

BLAST vs Swiss-Prot:
sp|P84516|PER1_SORBI, E-value = 6e-84

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522973Eragrostis curvulaSetaria italica6.5623.7291.6760forward
CNT30590929Eragrostis curvulaMusa acuminata1433.1684.38128forward
CNT30247174Eragrostis curvulaAvena sativa23.9623.7583.56219forward
CNT30457021Eragrostis curvulaSaccharum spontaneum3641.0786.32329forward

Expression of CNT30594691

Peptides detected in this lncRNA

>peptide 1 (34 aa)
CFIRQLLRLGSDYIVGSRLCDTSCVPTYVIHRCA*

>peptide 2 (90 aa)
MSLTTTLPAFWAGQICLRWEKNHWSMVGSRCGKRRLSKDGPQCAMPTVWPPESATRSVVSRLIFDSTAISAGTLEVGAGSPVRTSFSGAG*

Sequence

>CNT30594691
ATTGCTTTATTAGACAACTACTACGACTAGGGTCTGATTACATAGTAGGCAGCCGCTTGTGCGACACAAGTTGTGTGCCCACGTACGTCATACATAGGTG
TGCGTGACACGCCCCACCCTTTATTCGATCGCCGGCCGGATCCAGCAAAAGATCAACAACAAACCAAGCACGCACACACACACACACAGGTGCAGGAGGG
CTACAAACTCACCGGCGCACAAAGCCTAAAACATTAACACCACCCTGAGAGGAGACACACTACTAGTTCGATCTACTGCACGATCTAGAGCACGAGGGTC
TCTGCGGCGTCGACGACGGTCTCGACCACGGACCACGGGAGGCTAGCCCCGCCGGGGTTGCGCGCGGCGCAGTTGGCGCGGACCTGTCCCTGGGAGCCCG
TTAGCACGTTGATCTGCCCCATCTTGACGTACGAGTAGACGAACTGCTCAAAGAAGGCGTTCTGGTCGACGGCGAACTTGGTGACGAGGGGCTTGGTGGT
GGCGTTGACGAAGAGATCCTGGTCGGAAGTGAAGAGCCCCTCCCTGTTGAGCAGGTCGACGTAGTACTTGTTGTCGAAGACATTGGGCGTGCGGATGTCG
TTGACGACGACGTTGCCGGCGTTCTGGGCGGGGCAGATCTGCCTGAGGTGGGAGAAGAACCACTGGTCCATGGTCGGGTCGCGCTGCGGGAAGAGGCGGT
TGTCGAAGGACGGGCCGCAGTGCGCGATGCCCACGGTGTGGCCGCCGGAGAGCGCCACCAGGTCCGTCGTGTCCAGGTTGATCTTCGACAGCACCGCCAT
CAGCGCCGGCACGTTAGAGGTCGGCGCCGGGAGTCCGGTCAGGACTTCATTCTCCGGCGCCGGGTGAAGGCCGTCGCGCCGGCCCAGGGGCACCTTGTAC
CAAGGACCGCCAGC