Detailed information on CNT30594470


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7XR61|MTK1_ORYSJ, E-value = 2e-57

BLAST vs NONCODE:
NONORUT004829, E-value = 4e-101

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30366123Eragrostis curvulaSorghum bicolor84.3838.6990.53243forward

Expression of CNT30594470

Peptides detected in this lncRNA

>peptide 1 (94 aa)
TSFLMIRGGVVDHGSEEERLGHVIRHVLGEVRVLDAGDEALAEDDVRGLDVAHPDERHGPVEVEDLRHVVRAQAAVLPQRRGLEVGALPCHRPRV

>peptide 2 (30 aa)
MSDMARSKWKTSGTWSGHRRPCSRSAEASK*

Sequence

>CNT30594470
GCACCTCCTTTCTTATGATCCGTGGTGGTGTTGTAGATCATGGAAGTGAAGAAGAGCGTCTTGGCCATGTAATCCGACATGTGCTCGGCGAGGTGCGGGT
ACTCGACGCCGGCGATGAGGCCCTTGCGGAGGATGATGTGCGGGGGCTCGATGTAGCGCATCCCGATGAGCGACATGGCCCGGTCGAAGTGGAAGACCTC
CGGCACGTGGTCCGGGCACAGGCGGCCGTGCTCCCGCAGCGCCGAGGCCTCGAAGTAGGCGCGCTCCCTTGTCATCGGCCACGAGTCC