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Detailed information on CNT30593653


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694844Eragrostis curvulaOryza sativa18.623.2210085forward
CNT30677986Eragrostis curvulaSetaria viridis15.3222.3698.5770forward
CNT30244088Eragrostis curvulaAvena sativa24.0720.7994.55110forward
CNT30219096Eragrostis curvulaKalanchoe fedtschenkoi18.624.2294.1285forward
CNT30341799Eragrostis curvulaEragrostis tef71.5572.3594.19327forward
CNT30580802Eragrostis curvulaEchinochloa crusgalli24.0723.3194.55110forward
CNT30499286Eragrostis curvulaDigitaria exilis24.0726.1995.45110forward
CNT30556718Eragrostis curvulaPanicum hallii23.6324.1198.15108forward

Expression of CNT30593653

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MYLVLSVIWLSVMTTDVSILPEVTWHHLSSTTFFPILDL*

>peptide 2 (33 aa)
QLGLAHCLPYKTNERASAASFQVDLLQLRHFAF*

Sequence

>CNT30593653
CTCAGCTAGGGTTAGCCCATTGCTTACCGTATAAAACCAACGAGAGAGCTAGCGCCGCCTCCTTCCAAGTCGATCTTCTCCAGCTCCGCCACTTCGCCTT
CTGAGAGACAGGGGGGCGCGCCGGCGAGCGAGCTCCACCGCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGGATGAGGCGGCTCAAGAGGAAGCGCCGAA
AGATGAGGCAGAGATCCAAGTAGACATCCCTAGAGTTATCTGTGTCTGAAGGATCCTTTGCTGATCAATTGTGTTCTTTTGATCATTTTAGTTTTTTCCC
CTAGCCAGTGGAAAGAGTGCTGTCATGTACTTAGTACTTTCTGTTATCTGGTTATCTGTAATGACAACTGACGTTTCCATTTTACCCGAAGTTACTTGGC
ATCATCTGAGTTCCACAACATTTTTTCCTATTCTCGATTTATGATGTTCTGTGCTGG