Detailed information on CNT30590960


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697920Musa acuminataOryza sativa57.7514.4282.32164forward
CNT30104541Musa acuminataOryza rufipogon57.7515.2182.32164forward
CNT30578423Musa acuminataOryza barthii57.7514.682.32164forward
CNT30118048Musa acuminataOryza nivara57.757.8182.32164forward
CNT30604894Musa acuminataOryza punctata23.242.7287.8866forward

Expression of CNT30590960

Peptides detected in this lncRNA

>peptide 1 (93 aa)
EDVDQRASRRVDGGGGVHYEDVDQRASRRVDGGGGVHYEVESQFLELLWRVQGGVPTLQHVGSPETIGALADLPHLVVAPRCLHEARICSCLHK

>peptide 2 (56 aa)
MRWNPSSLSSCGVCRGVYPPSSMLAALKPLVRLQTSLISSSLRGASTKHASAPACTR

Sequence

>CNT30590960
GAGGACGTCGATCAACGCGCGAGCCGACGCGTAGACGGCGGTGGTGGAGTGCACTATGAGGACGTCGATCAACGCGCGAGCCGACGCGTAGACGGCGGTG
GTGGAGTGCACTATGAGGTGGAATCCCAGTTCCTTGAGCTCCTGTGGCGTGTGCAGGGGGGTGTACCCACCCTCCAGCATGTTGGCAGCCCTGAAACCAT
TGGTGCGCTTGCAGACCTCCCTCATCTCGTCGTCGCTCCGCGGTGCCTCCACGAAGCACGCATCTGCTCCTGCCTGCACAAGGT