Detailed information on CNT30590929


BLAST search results

BLAST vs Swiss-Prot:
sp|Q96520|PER12_ARATH, E-value = 4e-32

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30553544Musa acuminataOryza glaberrima21.2411.6184.1582forward
CNT30596085Musa acuminataOryza meridionalis21.245.1485.3782forward
CNT30101479Musa acuminataOryza rufipogon21.247.8584.1582forward
CNT30594691Musa acuminataEragrostis curvula33.161484.38128forward

Expression of CNT30590929

Peptides detected in this lncRNA

>peptide 1 (82 aa)
GVHKLAEEQGLVGGKAGDEGLGPGVAEQALVGGEEALLAYEIDVVLVVEGIGRPDVVDGGVGCVFDRAGPVEVLGEGRWCRV*

>peptide 2 (33 aa)
MRVVTSDVGEGRKLRTASRVAKLRPSRRPSGTL*

>peptide 3 (43 aa)
EYTNLPKNKGWLAAKLVTRGLVLESPNRPWSEVKRPCLLTRST*

Sequence

>CNT30590929
GGAGTACACAAACTTGCCGAAGAACAAGGGCTGGTTGGCGGCAAAGCTGGTGACGAGGGGCTTGGTCCTGGAGTCGCCGAACAGGCCCTGGTCGGAGGTG
AAGAGGCCCTGCTTGCTTACGAGATCGACGTAGTACTTGTTGTCGAAGGTATTGGGCGTCCGGATGTCGTTGACGGTGGTGTTGGTTGTGTCTTTGACCG
GGCAGGTCCGGTAGAGGTTCTTGGCGAAGGTCGGTGGTGTCGAGTTTGAGCTTGGCGAGGGCGTTGATGAGGGTGGTGACGTCGGATGTAGGCGAGGGGA
GGAAGCTGAGGACGGCATCCCGGGTCGCGAAGCTCAGGCCATCTCGCCGGCCCAGTGGAACCCTGTAGTCGGGGCCGCCGGACTAG