Detailed information on CNT30590425


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30358201Musa acuminataLactuca sativa3419.2483.09136forward
CNT30101583Musa acuminataOryza rufipogon32.55.1982.31130forward

Expression of CNT30590425

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MSSSRTASTSWSRCGEVHRLYWATLYGSEK

Sequence

>CNT30590425
GCCAAAATCAAATTTCCCAAAAAAGCCCCAATGTCGAACCCCATAGGTCCATAAAATGCAAACTCTGGATCAATGACCTGTGTTGAATCACTAGTCACCA
TGATAGAACCAGTATGCAGATCTCCATGAATTAAAGCTTGTGCCCTCTCACAGAACCTACATGACAAGATTTAGGCAGCAGTAGGTATACAAGGAAAAAG
AAAACCAAATGAGGTTCACGGACTAAAAACAAAAGGAAAACATGATAAGAGAAGCGTGTTGAAACACAATTATACATAGACTTCAATTCAGCTACTTCAA
TCTTTAAAATGTCATCATCCCGAACTGCCTCAACATCATGGTCAAGGTGTGGCGAAGTCCATCGATTATATTGGGCCACCTTATATGGGTCTGAAAAGAC