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Detailed information on CNT3058868


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30388096Amborella trichopodaTriticum turgidum3.3927.49060forward
CNT3015736Amborella trichopodaZea mays3.3921.8291.6760forward

Expression of CNT3058868

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MYLLTTTLLAVPAEQGKQARHGCRSLRLLSKQCYLDS*

Sequence

>CNT3058868
AAATAGGGGAATTCTAATAGAATCCAACCGCGAAGCAAGCGCGGCCGCTTGCTTAGCCGGTTTTTGTCGTATATATAGAGGTGTCTGAAAATGCAATCTT
AATGTACTTGCTGACAACCACCCTTCTTGCTGTGCCTGCTGAGCAAGGCAAGCAAGCGCGACACGGTTGCCGATCGCTGCGCTTGCTCAGCAAGCAGTGC
TACTTGGATTCTTGACTACATTCATTAACGCCATTCACGCTGGCGTCGATGCGCATAGAAAATTAACGGCATTAACGCCATTCACCCCCGGGGGGGGAAA
GCAAGCAAAGCTTGCCCTGGCGCGTATAGGATTTCCAAGCCTATACCAATTTTCAATTGTTTCTCTTTAACGCCATTAACGCCAAGAGTTTATAACCCTT
TTCTTTTCGCGCTTGCGAAGCAACAGCTGCGCGGATGGCGTAAATAATTAGTCGAAAACCGCTTGCGCTGTGGGAATCCGTTCAACCGCCCTGAATCCGC
GACGATCCGCATAGCTCCGCATAGCTCCGCATAGCTCCGCATAGCTCCGCTTGCGGCGGTTCGCGCCTTACTGATTAAGCTTTCAGAATTAGAAAGGGGG
TGTAGTTCAGTAGGTAGAACGTATGCTTTGCACGCATAAAGTCATCGGTTAAAACCCGGTCATCTCCAACAGCGCTAAGAGATCTACAATTCAAACTTTT
GTAAACCGAAAGGTCACTTAAAGAGCAGACATATTCGCAGGTTATCGCGGAACCGCGCTTGGACCGAAGGTAAGCAAGCGCCGTTATCAGCTACGCTGAT
CTTGCTCAGCAACTAACGGCTTGTTGCGAAGCAAGGTTCTTGCGCAGCAGGCTAGTTGCGATCTTTACAGCTTGATCAAGCCTAGTAGCTAGGCTGAAAC
GGCCCTCAGCAAGCGCGGTCAGCTCCACAAGCTTATATCATACAAATATCTGCTTCGAACCGCGCTTGCTTGCCTTGCTCAGCAGGTAGGCTTGGCTGAG
CCCGTCCGCCTCAGCAAGACCTGCTTACCGTGCGTATATCGGCGCGGCAAGGCTACATAGCGGCCGTTCCGCGCCTACATACCAGCGACCCGGCTAATAG
ACCTATTTCTGCTACGTAGGTAAGCAGGCGAATCGAACCGGGGCGCTTGCTGTGCCTGCTGAGCAAGGCAAGCAAGCGCGGTTCGAGGCTGTTATGCAGG
TCTAACTGACTTGCGCGACCCTACCCGCTAACTTGCTGTGCAAGCCCTTCGCAAGCCTCGAACGGTTAGGCGTGGTATGCAAATCACGCGGGTAAGCAAA
AAAACTAGCATAGGGCGCAAGTTCTTCTTAAAGTAACTATTGCGCACGAGAAAAGTTCGCTTTAGCCGCCTTGAAGCTGCCTGCAAGCAAACACAAAACA
AACAAGAGTTTGATCCTGGCTCAGAATGAACGCTAGCAACAGGCTTAACACATGCAAGTGGAACGAGCATGTGAAGATTTTCATCTGCAAGTCGCAAACG
GGTGAGTAACACGTGAGAATCTACCTAGCAATTCGGCATATCTCTAAGTATTATGCGCTCTTAGTGAACATACTAAAGAGTCTCGCTTATATGCTTAAAA
TACCGAAGAAAAAGATGTACTTTTGTTTTCTGCATACCTGCATTCAGGCGGCCTAGATCCAGCAAAAGAAAAATGTTCAAAAGCGCGAAGCTGCTTCGCA
TGTAACCGCGTACGCGGTTGTAGCGCGATATGAAGAAGAGAAGAAAGAACACAAAAAAGGCAAAGTCCCG