Detailed information on CNT30587554


BLAST search results

BLAST vs Swiss-Prot:
sp|P00287|PLAS_PHAVU, E-value = 2e-42

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30708891Musa acuminataGlycine max20.1217.6689.898forward
CNT3085352Musa acuminataVigna radiata20.3312.685.8699forward
CNT30620289Musa acuminataCajanus cajan21.1512.6487.38103forward
CNT30148503Musa acuminataBrachypodium distachyon13.1420.4593.7564forward

Expression of CNT30587554

Peptides detected in this lncRNA

>peptide 1 (72 aa)
MEMEPTLTPAGISSSSNTTLWGNPALFLNTIVSPEGTENSLGTKVGMVTAALVKLAITASELILTGFCGFNN*

Sequence

>CNT30587554
CTCTTAATATAAGCAAGACTCGGGAGTGGCACACCAAGCACAGTGAGCTTAGTTAACAGTCACCTTCCCCACCATTCCAGCTCCCTGGTGAGGAGCGCAG
TAGAAGGTGTAGGTCTCGCCTGGGGCATTCAGTAGGTCCTCCTCGGGCATGGAGATGGAGCCGACGTTGACACCCGCGGGGATCTCGTCCTCGTCGAACA
CCACGTTGTGGGGGAACCCGGCGTTGTTCTTGAACACGATCGTCTCCCCCGAGGGCACCGAGAACTCGTTGGGCACGAAGGTGGGGATGGTGACTGCTGC
GCTGGTCAAGCTGGCCATTACTGCGTCTGAGCTTATCCTCACCGGTTTCTGTGGCTTCAACAATTAAATGGGAAGATGGAAAGTATATATATTATATATA
TAGTCACAGGCAACTCCACAAGAATCAAGAGAGAGAGAGAGAGACGAAGGATTGGATAATGGGTGGCTAGGAAGGGAGGAGTTATCT