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Detailed information on CNT30586986

BLAST search results

BLAST vs Swiss-Prot:
sp|Q943L2|H2B11_ORYSJ, E-value = 2e-54

BLAST vs NONCODE:
NONGMAT000269, E-value = 5e-58

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30693619	Musa acuminata	Oryza sativa	53.39	29.86	88.89	189	forward
CNT30675682	Musa acuminata	Setaria viridis	53.39	41.72	88.89	189	forward
CNT30523142	Musa acuminata	Setaria italica	63.84	43.46	90.71	226	forward
CNT30315505	Musa acuminata	Corylus avellana	45.48	35.23	86.96	161	forward
CNT30518328	Musa acuminata	Juglans regia	75.14	51.35	86.47	266	forward
CNT30702570	Musa acuminata	Quercus lobata	33.33	23.6	88.14	118	forward
CNT30618877	Musa acuminata	Sesamum indicum	75.14	33.8	84.59	266	forward
CNT3072234	Musa acuminata	Quercus suber	49.72	27.94	81.25	176	forward
CNT30379403	Musa acuminata	Manihot esculenta	74.58	46.98	80.3	264	forward
CNT30526608	Musa acuminata	Phaseolus vulgaris	75.14	32.88	83.08	266	forward
CNT30632073	Musa acuminata	Vigna unguiculata	45.2	21.28	87.5	160	forward
CNT30196132	Musa acuminata	Pisum sativum	30.79	23	88.07	109	forward
CNT30181099	Musa acuminata	Secale cereale	72.32	31.68	88.28	256	forward
CNT30304304	Musa acuminata	Triticum aestivum	72.32	51	89.84	256	forward
CNT30220727	Musa acuminata	Hordeum vulgare	72.32	32.82	88.67	256	forward
CNT30395424	Musa acuminata	Triticum turgidum	72.32	53.22	89.06	256	forward
CNT30565715	Musa acuminata	Actinidia chinensis	75.14	33.89	85.71	266	forward
CNT3086649	Musa acuminata	Vigna radiata	70.62	33.51	82.8	250	forward
CNT30510004	Musa acuminata	Solanum lycopersicum	19.21	22.3	88.24	68	forward
CNT30552027	Musa acuminata	Oryza glaberrima	72.32	47.5	88.67	256	forward
CNT30171046	Musa acuminata	Trifolium pratense	75.14	74.93	81.95	266	forward
CNT30443203	Musa acuminata	Aegilops tauschii	72.32	39.02	89.45	256	forward
CNT30244799	Musa acuminata	Avena sativa	72.32	35.65	88.28	256	forward
CNT30666231	Musa acuminata	Triticum dicoccoides	72.32	40.89	89.45	256	forward
CNT30597299	Musa acuminata	Fraxinus excelsior	75.14	48.45	79.7	266	forward
CNT30457276	Musa acuminata	Saccharum spontaneum	72.32	24.02	90.23	256	forward
CNT30130711	Musa acuminata	Lolium perenne	72.32	37.65	88.67	256	forward
CNT303693	Musa acuminata	Zea mays	30.79	31.59	95.41	109	forward
CNT30606042	Musa acuminata	Gossypium raimondii	42.66	49.51	82.12	151	forward
CNT30231835	Musa acuminata	Ananas comosus	35.03	19.08	91.13	124	forward
CNT3066775	Musa acuminata	Leersia perrieri	35.31	32.55	93.6	125	forward
CNT30205622	Musa acuminata	Helianthus annuus	18.64	24.44	90.91	66	forward
CNT30129800	Musa acuminata	Corymbia citriodora	74.01	32.55	89.69	262	forward
CNT30684130	Musa acuminata	Triticum urartu	72.32	35.31	90.23	256	forward
CNT30722585	Musa acuminata	Triticum spelta	72.32	34.92	89.84	256	forward
CNT30346527	Musa acuminata	Eragrostis tef	50	83.89	89.27	177	forward
CNT30363575	Musa acuminata	Sorghum bicolor	72.32	27.77	89.45	256	forward
CNT30619778	Musa acuminata	Cajanus cajan	34.46	18.43	86.89	122	forward
CNT30596761	Musa acuminata	Oryza meridionalis	53.39	23.92	86.24	189	forward
CNT30360078	Musa acuminata	Lactuca sativa	33.33	14.9	86.44	118	forward
CNT30369945	Musa acuminata	Oryza glumipatula	72.32	36.78	85.94	256	forward
CNT30429187	Musa acuminata	Papaver somniferum	30.79	10.46	82.57	109	forward
CNT30570929	Musa acuminata	Vitis vinifera	69.77	36.81	83	247	forward
CNT3052765	Musa acuminata	Amborella trichopoda	35.03	24.41	82.26	124	forward
CNT30108786	Musa acuminata	Oryza longistaminata	27.4	2.87	93.81	97	forward
CNT3024772	Musa acuminata	Populus trichocarpa	50.28	30.02	79.78	178	forward
CNT30327286	Musa acuminata	Asparagus officinalis	74.01	28.98	92.37	262	forward
CNT30149313	Musa acuminata	Brachypodium distachyon	34.75	35.24	85.37	123	forward
CNT30101075	Musa acuminata	Oryza rufipogon	33.33	16.83	92.37	118	forward
CNT30576366	Musa acuminata	Oryza barthii	35.31	23.85	94.4	125	forward
CNT30496069	Musa acuminata	Digitaria exilis	72.32	32.08	88.67	256	forward
CNT30174435	Musa acuminata	Vigna angularis	45.2	23.88	88.12	160	forward
CNT30557628	Musa acuminata	Panicum hallii	46.05	29.26	88.34	163	forward
CNT3065708	Musa acuminata	Selaginella moellendorffii	30.79	31.41	81.65	109	forward
CNT30114697	Musa acuminata	Eutrema salsugineum	75.14	43.39	78.95	266	forward

Expression of CNT30586986

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MSLMKEFIMDIALLEIPMSGCTCFSTLKM*

>peptide 2 (44 aa)
KDQELVNLVTALVPSETACFASSPGSTRRTEVWISREVMVGFLL*

>peptide 3 (99 aa)
ERSRASELGHRLGALGDGVLRELSGEHQADRGLDLAGGDGGLLVVAGKARGFLGQLLEDVVDEGVHNGHSLAGDTDVRVHLLQHLEDVDLVDVGYLDQK*

Sequence

>CNT30586986
GAAAGATCAAGAGCTAGTGAACTTGGTCACCGCCTTGGTGCCCTCGGAGACGGCGTGCTTCGCGAGCTCTCCGGGGAGCACCAGGCGGACCGAGGTCTGG
ATCTCGCGGGAGGTGATGGTGGGCTTCTTGTTGTAGCGGGCAAGGCGAGAGGCTTCCTGGGCCAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCATAA
TGGACATAGCCTTGCTGGAGATACCGATGTCCGGGTGCACCTGCTTCAGCACCTTGAAGATGTAGATCTTGTTGACGTAGGATACTTGGATCAAAAATAG
AACTGCAAGTGCACCAGCTAAGATATTACGAACTCGAGTAATTATTATTTTAAT