Detailed information on CNT3058565


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30577845Amborella trichopodaOryza barthii20.077.5889.4757reverse complement

Expression of CNT3058565

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MDLLTLSAAELTFVLLVWWVATKTISLCSSKDLERLIHKKR

>peptide 2 (52 aa)
FKSTTPYVVSVWGDRCGREVPHFDSRPVSISDPRSGITPLGLFFGPELAGSL*

Sequence

>CNT3058565
TTTCAAGAGTACTACCCCGTACGTAGTCTCTGTCTGGGGAGACAGGTGCGGTAGAGAGGTCCCGCACTTCGATTCCCGTCCCGTTAGCATCTCTGATCCG
AGATCAGGGATTACTCCGTTAGGTCTTTTCTTCGGTCCGGAGCTGGCCGGTAGCCTGTAATGGACCTACTAACCTTGTCAGCAGCAGAGCTCACCTTTGT
TCTATTAGTTTGGTGGGTGGCTACCAAGACGATTTCTTTATGCTCATCAAAGGACCTCGAGAGGCTAATCCACAAAAAACGATA