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Detailed information on CNT30583246


BLAST search results

BLAST vs Swiss-Prot:
sp|A2Y886|PLAS_ORYSI, E-value = 1e-61

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30226316Echinochloa crusgalliHordeum vulgare11.2522.8286.697forward
CNT30102318Echinochloa crusgalliOryza rufipogon36.0850.1687.14311forward
CNT30557443Echinochloa crusgalliPanicum hallii23.3230.1895.02201forward

Expression of CNT30583246

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MLAIKLVHTNTCGNAQIKTISSYRSGKGRLLSLSSSLDGWMKIVR*

>peptide 2 (70 aa)
MVSPALTENSLGSKTRTPPLAPSSTSWAMARTVNDDGLLLLLLLLSTARAGRKEGAVTAAEEREAIVLFG*

Sequence

>CNT30583246
GCTAGGAAATATATACACACAGTACGTACTGAGCTGACGGAGATATACAGAATAATTTAATACTGCAGCAAACAAATGGAAAATATATGTATGTCTGACT
CAATAATTGATGTAGCAATAGCATGCTTGCAATTAAATTAGTACATACAAACACATGCGGCAATGCACAAATAAAGACCATATCATCATATCGTAGTGGC
AAAGGGAGGCTTCTCTCTCTCTCATCTAGCTTGGATGGATGGATGAAGATAGTACGATAGGTGATCGATGGTCGACGCGTGATGGATGATTAGTTAACGG
TGACCTTGCCGACCATTCCTGCTCCTTGGTGCGGCTCGCAGTAGAAGCTGTAGGTTCCCGGGACGGTGAGGGTGACGGAGTAGGTCTCGCCTGGGGCGTT
GAGGTACTCCTCCTGCGAGATCTTGCCGGCGTCGACTCCGCTGGGCACCTCGTCCTCGTCGAAGACGACGTTGTGCGGGTAGCCGGCGTTGTTCTTGAAG
GTGATGGTGTCGCCGGCCTTGACGGAGAACTCGCTGGGCTCGAAGACGAGGACGCCTCCGTTGGCGCCGAGCAGCACCTCCTGGGCCATGGCGCGCACGG
TGAACGATGACGGCCTCCTGCTGCTGCTGCTGCTGCTGAGCACGGCGCGGGCGGGGCGGAAGGAAGGGGCGGTGACGGCGGCAGAGGAGAGGGAGGCCAT
TGTTTTGTTTGGTTGATAGAAACGGCGACGGTGCGTGGAGGAGCAGGGAACCAGAGGTGGTACGGGAACGGGAGGGAGCAGCAACACAAGCTAGGCAGCT
GGAGGGAAGAAACAAATAGGAAGAGAGGCTGGCAGTGGCAAGGAATGGGTGGCCAGGGAGCC