Detailed information on CNT30580745


BLAST search results

BLAST vs Swiss-Prot:
sp|Q07473|CB4A_ARATH, E-value = 3e-35

BLAST vs NONCODE:
NONBNAT002655, E-value = 1e-27

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672010Echinochloa crusgalliSetaria viridis56.2527.596.91162forward

Expression of CNT30580745

Peptides detected in this lncRNA

>peptide 1 (75 aa)
LAGILPGDAGEPLDGEGAEGGEHGPAAVDELALAEALEAEDLAVGLERGGFHLGGLEAGAQECARRGGHRRSHGC*

>peptide 2 (32 aa)
MCSPRRPPTKPWLLSTPRCSFGSGGGVCGGERE

>peptide 3 (44 aa)
TLPASCQVTPVSHSTERAPRVASMAQRPWMSSHSRKRWRPKTSL*

Sequence

>CNT30580745
ACCTTGCCGGCATCCTGCCAGGTGACGCCGGTGAGCCACTCGACGGAGAGGGCGCCGAGGGTGGCGAGCATGGCCCAGCGGCCGTGGATGAGCTCGCACT
CGCGGAAGCGCTGGAGGCCGAAGACCTCGCTGTAGGGCTGGAACGGGGTGGATTTCACCTCGGCGGACTCGAAGCGGGTGCCCAGGAATGTGCTCGCCGC
GGCGGCCACCGACGAAGCCATGGCTGCTGAGTACTCCTCGGTGTTCTTTTGGGTCCGGTGGTGGTGTGTGTGGCGGGGAGAGGGAGGG