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Detailed information on CNT30577766

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30555037	Oryza barthii	Oryza glaberrima	64.79	100	100	438	forward
CNT30369237	Oryza barthii	Oryza glumipatula	25.74	15.99	82.76	174	forward
CNT30104394	Oryza barthii	Oryza rufipogon	23.52	39.85	90.57	159	forward
CNT30116594	Oryza barthii	Oryza nivara	25.44	59.93	86.63	172	reverse complement

Expression of CNT30577766

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MTPVIFRATYWLRCWAQLQKCEDDGELMKVACRRLETTVMQLFANYEWGFTNRLE*

>peptide 2 (54 aa)
MANESEATAAKKRAATGLGGSVAWCNGAQQWWWSSLRRRRWCLLRRKWIRGGGY*

>peptide 3 (47 aa)
MNGDSQIDLNKCVLLISVWSFISVWSFILLGVFNFILNYTLRLSDTL*

Sequence

>CNT30577766
CAAAAATCGACTTTTGGAAAGCAATCAACCAAGAGGACCTCATGTGAAAACTAATAGAAACGCGGGCGGATCCAGTCGGTGGTGATGGATCCAGGTGATG
GCAAATGAATCCGAGGCGACGGCAGCTAAGAAGAGGGCTGCGACGGGTCTTGGGGGCAGTGTAGCTTGGTGCAACGGAGCTCAGCAGTGGTGGTGGAGCT
CGTTGAGGAGAAGGAGGTGGTGCTTGTTGAGAAGGAAGTGGATCCGAGGTGGTGGCTACTAACAAGAGGGGCGGTGGCAGTGGAGGGTGGAGGACGTCGG
ATCTGGCCTCCTACGCAGTGCGACCACCATGACACCGGTAATTTTTAGGGCAACATATTGGCTCCGGTGTTGGGCACAGCTGCAAAAGTGTGAAGATGAT
GGAGAGCTTATGAAGGTTGCATGTCGTAGGCTTGAGACGACAGTTATGCAACTTTTTGCAAACTATGAATGGGGATTCACAAATAGACTTGAATAAATGT
GTACTCCTTATCTCGGTTTGGTCTTTTATTTCGGTTTGGTCTTTTATTTTGTTGGGTGTGTTTAATTTCATTTTGAACTACACTCTTCGTTTGAGTGATA
CTTTGTAATAATTGGCTGTAGCTTTGATGAGCAAAGGCCGGAATGTTTCATTCCATTATCTTAAAAAAAGGTAATT