Detailed information on CNT30575341


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30603719Oryza barthiiOryza punctata48.3553.6587.43191forward

Expression of CNT30575341

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MAFQLDNGYYSHQGTHAFPLLVASPIAIAVSSSILASSVLLLPI*

>peptide 2 (42 aa)
TSSNYFFVLLLLIRRPSLGSKRRKFPLFVCGIYHIYLNRSTK*

>peptide 3 (46 aa)
HLLQLFLCSPPPDSSSVPRKQKEKVSTLCLRDISYISQSIDEVIRG*

Sequence

>CNT30575341
CACCTCCTCCAATTATTTCTTTGTTCTCCTCCTCCTGATTCGTCGTCCGTCCCTAGGAAGCAAAAGGAGAAAGTTTCCACTCTTTGTCTGCGGGATATAT
CATATATATCTCAATCGATCGACGAAGTGATCAGGGGCTAGCTCCTTTGCGCTGCGGCTTTGACCGCGGTGTCGAAGCTTCTTGCACATGGCCTTCCAGT
TGGACAACGGGTACTACTCCCATCAAGGTACGCACGCATTCCCGCTTTTAGTTGCCTCTCCGATCGCGATCGCTGTTTCTTCCTCGATCCTCGCTTCTTC
AGTTCTTCTTCTTCCTATTTGATTCTTCTTCCCTTCTTTGCTTCTGTGAACACAGTTTTTGCCTGTCGATCGAACTGTACGTACGTGAGATGCCC