Detailed information on CNT30574979


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30149335Oryza barthiiBrachypodium distachyon30.078.5785.51138forward
CNT3099878Oryza barthiiOryza rufipogon99.7865.4395.2458forward

Expression of CNT30574979

Peptides detected in this lncRNA

>peptide 1 (39 aa)
AVAYKVKEGGHLVDSSVEVHTTWLLLAAGVQRVGVGSKG*

Sequence

>CNT30574979
GCGGTGGCATATAAGGTGAAGGAGGGCGGACATTTGGTGGATAGCTCTGTGGAGGTGCATACGACATGGCTTCTTCTGGCTGCTGGGGTGCAGCGGGTGG
GAGTGGGGTCGAAGGGTTAACCATTCCAGACTGAGGCGGTTGTGAATATTGAGGAAATTGGGGGGCCTGATACTGCTGGTGCATGGTTTCAATCGGCTGA
GCAGGTGGAGCATAATAGGGATCCCGTGGTAAAGTTGGCACCGAAGGAACTGGAGCAGAAGGAGGAACCGGTGGTACTTGTGAATGTGGCAGATGTCCTG
GATACTGTGATGGAGGTTGGCTTTGAAGCGTTGGAGGTGGAGGAGGCGCATTTGGAGCAGGAAGGGCAGGAAGTGCTAGTGGTTGTGAAGAGGTGAGGGC
TTGATGCTGTGGTTGAATGGCTGCCTGCTGTGGAGCTACTGCATGCTGGTGTGAATCTG