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Detailed information on CNT30574947


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002867, E-value = 2e-55

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693591Oryza barthiiOryza sativa35.587.9888.56201forward

Expression of CNT30574947

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MRFWFFSSGFLIRSIRRTSRRRHIDCVFSTPI*

Sequence

>CNT30574947
TGGTAATACAGAAGGAATCATATAAGAAATTTGTTTTAAAAAAAACTCGCATGCTAACTTGAGACGATCAGACTCCTAACTACAGCTCATAATTTTCTAA
ATATATATATATCCAAACGATTTTTCACAGTGAGTTTCATCTTAACTAAACCATATAACAATAATAAGTTTAAAATAGACTTCACTCGTTGTAACGCACG
GACATTTTTATCTAGTAGGAAAAAAAAACATCTCGTCGTAAAAATTTGTCCGTCTTAAAAAAGAAGAAAAAGAGTCTCGCCAGTAAAAAACCAAAAAGAA
AGTCCGTTTGGTTTTTAATTTGGCACAGGTATTTTTTTCTGATCTTTTTGCACGCGAAAGAGTTTTTTTTTCGCACGCGCTTAGGCTCCTGGTTCCGTCC
GTTTTTTAATCTGATCGCGCCTCCTGTCAATTATTTTGACGCCGGTTTTTTACCCATGCGCTTTTGGTTTTTCTCATCTGGTTTTTTAATTCGTTCTATT
CGCCGCACGTCGCGCCGCCGCCATATCGATTGTGTGTTTTCTACTCCAATTTGATTGCAAAAATC