Detailed information on CNT30574748


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690709Oryza barthiiOryza sativa10066.07100257forward
CNT30354415Oryza barthiiEragrostis tef33.859.6786.2187forward
CNT30595176Oryza barthiiEragrostis curvula38.1311.5489.898forward

Expression of CNT30574748

Peptides detected in this lncRNA

>peptide 1 (29 aa)
RRYPLQLDGQLLSYIFGTTLAKCARTRIL*

>peptide 2 (31 aa)
SLPFATRWSTSVLYLWYNTGKVCAHKNPVKK*

>peptide 3 (36 aa)
MVNFCLISLVQHWQSVRAQESCEEIKLIPVQEWCGI*

>peptide 4 (39 aa)
MKITSMARMAIWQRSGIILYSTTSNRNHINVAPARTPADK

Sequence

>CNT30574748
CGTCGCTACCCTTTGCAACTAGATGGTCAACTTCTGTCTTATATCTTTGGTACAACACTGGCAAAGTGTGCGCGCACAAGAATCCTGTGAAGAAATAAAG
CTAATACCTGTCCAAGAGTGGTGCGGCATTTGACCAAATGAAGATCACAAGCATGGCAAGAATGGCAATCTGGCAAAGGAGCGGAATTATATTGTATTCT
ACTACATCGAACAGGAACCATATCAATGTTGCCCCAGCAAGGACCCCCGCAGATAAG