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Detailed information on CNT30567662


BLAST search results

BLAST vs Swiss-Prot:
sp|P45850|OXO1_HORVU, E-value = 5e-26

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30382100Actinidia chinensisManihot esculenta27.4816.485.5483forward
CNT3045720Actinidia chinensisPrunus dulcis34.4417.3382.69104forward
CNT30223627Actinidia chinensisHordeum vulgare34.4422.5682.69104forward
CNT30240637Actinidia chinensisAvena sativa29.4722.8886.5289forward
CNT3061946Actinidia chinensisArabidopsis lyrata20.5317.6688.7162forward
CNT30599980Actinidia chinensisFraxinus excelsior27.8130.1184.5284forward
CNT30140763Actinidia chinensisLolium perenne19.5421.0786.4459forward
CNT30573105Actinidia chinensisVitis vinifera44.3722.1585.07134forward
CNT30706383Actinidia chinensisPrunus avium34.4416.5684.62104forward

Expression of CNT30567662

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MEMPRVLSPGICITFTGVTYEPTLFDVFPGVRNPEKKKSSAFAIFGSLQNFPFTN

>peptide 2 (37 aa)
VKRRFSGLDVTNPTYSVPSNTTRISVARGCVWGGFWP*

Sequence

>CNT30567662
GGTGAAGAGACGATTTTCTGGATTGGATGTGACAAACCCAACGTATAGTGTGCCTTCCAATACCACAAGGATCTCAGTTGCACGAGGGTGTGTGTGGGGT
GGGTTCTGGCCATAAGGTGCATAGTCAACACGAACCATGGAGATGCCAAGAGTGTTAAGCCCTGGAATTTGCATAACATTTACTGGAGTCACGTATGAAC
CAACTTTGTTTGATGTATTTCCTGGTGTAAGAAATCCTGAAAAGAAAAAATCTTCCGCTTTCGCCATCTTTGGATCCTTGCAGAATTTTCCGTTCACAAA
CA