« Back to Actinidia chinensis search


Detailed information on CNT30567592


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30277964Actinidia chinensisChenopodium quinoa10.3925.0482.67150forward
CNT30628805Actinidia chinensisVigna unguiculata11.0129.7883.02159forward

Expression of CNT30567592

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MLKVSAISSGVIPFSMSATVWHVKSSRLLIFR*

>peptide 2 (31 aa)
MIQVFRNTNPKHKNKKTTITKGVCKNRYADK*

>peptide 3 (33 aa)
MQSSHNLLLTPFQIVYPLFLFFPFWMSQIAHPL*

>peptide 4 (50 aa)
QAKEFLACHNKPIVSYYPATSKYGRDCKLFNNSQSPLTKPPEFSCYLHLK*

Sequence

>CNT30567592
CACAAGCCAAGGAATTCCTTGCATGCCATAATAAACCAATAGTATCCTACTATCCTGCTACGTCAAAATATGGGAGGGATTGCAAGCTGTTTAATAATTC
CCAATCACCACTAACAAAACCACCAGAATTCAGCTGTTATTTACATTTGAAGTAGAACCCATGTTGAAGACTGACTAAAGTCAGATAACGATAAAGTCAT
AGAGTGTACTTAAACGGGGACACTTAAAATCTCATAAGTAGCACTATACCATATGCCATATTTTATAGGTTTCTGTTTCTTTGCAAGTTTGCTTTAACCA
TAAATTACGACGTCTTAATCAAATGCCCACTGATTCAAACGACGAACCTCTTCCTCTTCCTCACGGGTGACGTGATTCTTGATGTTGAAGGTCTCCGCAA
TTTCATCAGGAGTCATCCCTTTTAGCATGTCTGCAACAGTCTGGCATGTCAAATCCAGCAGGCTCTTGATATTCAGGTAGTTTGCAGCCTGAGGATAGCA
TAGTAAATTAGAATAAGACACAAAACAGATAAAAGCATGGGCCATACATGCAAGGTGGTTCAAATCATTATCAAGAATTACAGCTAAATGACAAAGCTAG
CAAATTTTAATAATTTATTAAGTACAAATATTGATAGATAAGTTGAAAGAGAGTTGAACTATAGTCTCTTTATTGTAAGAGTGCAGCTCAAGTGGCTGGA
GTGTCTGGACAAAGTTCCCATTCAATAACTATAAGAATCAAACAGGAGAACCTGGATTAAGGAACATCAACTCAAGGCATATGCACAAACCTTTAAGCTG
TGGAATACACTAGCAATTGCAAATCAATGATTCAATGGACAGAAACTTCACGATGCAAGTTGCAGATAACATGAGATTAATTCAGTAACTTATGATCCAA
GTGTTTAGAAATACAAATCCAAAACATAAAAACAAGAAGACCACAATTACCAAAGGGGTATGTAAAAACAGATACGCGGACAAGTAAATCACGTCTATGG
GCTTAGAAGATCATAACATGAAGTGAATGCAAGCATTTAAGATCAAAACAACTTGAAGTTAGCTAATTGGAACGTGCATCACGACGGCCAAGCCAAAAAT
AAAATAAAAATATAACATGGCTAGTCAGACCTGCGAGAAAAAAAATATTTGACAATGCAATCTTCTCATAACTTATTACTCACTCCGTTCCAAATTGTTT
ATCCACTTTTCCTTTTTTTTCCTTTTTGGATGTCCCAAATTGCTCATCCACTTTGAAAAATCAACTATCAAAATATTGTATAAACTTCCTTCACTTTGGA
ATTGGTGACACACATCCACTTTTCCGCTTTTCGGTAATTTAAGATTGATGAAGATTAATTTTGGTTAGTTGAAACTTTTAAAGTGTAGCAGTGGCATATT
TGACTACTTAACAAGTTGGATTCCCTAAATGAACAAACAAATTG