Detailed information on CNT30567387


BLAST search results

BLAST vs Swiss-Prot:
sp|P93111|HEM11_CUCSA, E-value = 6e-171

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30381428Actinidia chinensisManihot esculenta40.9649.6284.69392forward
CNT30172717Actinidia chinensisTrifolium pratense48.5932.9181.94465forward
CNT30146035Actinidia chinensisMedicago truncatula7.6329.5586.373forward
CNT3022469Actinidia chinensisPopulus trichocarpa15.5745.8584.56149forward
CNT30118924Actinidia chinensisCitrus clementina29.7851.4486.67285forward

Expression of CNT30567387

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MLEQPTDVPTKATDPLPDFDDLFDLSQDLTFSQNQ*

>peptide 2 (42 aa)
MAETLSSVLFTTTILVHPFATKCLITSFPILPAPITNILAVE*

>peptide 3 (64 aa)
MPLLRSSMALLVLFEISSPIFDKHLSSSATLILSAYALNFLIVGTVSRESLHDSNSFDSSAIIA*

>peptide 4 (35 aa)
MFDHKLPHLACSDHQHPCSRMRGFRKLHQGQLNSS*

>peptide 5 (38 aa)
LGESPAVTPVTSKMLHRTMKELVNDAPTKIINGPPCFV*

Sequence

>CNT30567387
CTCGGTGAGAGTCCGGCTGTCACTCCCGTCACATCTAAGATGCTGCATCGGACCATGAAGGAGCTTGTTAACGATGCCCCTACTAAGATCATCAATGGCC
CTCCTTGTTTTGTTTGAGATATCGTCACCCATTTTTGACAAGCATTTGTCTAGCTCTGCAACTCTGATTCTTTCAGCATATGCCCTCAATTTCTTGATCG
TGGGAACGGTCTCCAGAGAATCCCTCCACGATTCGAATAGCTTTGATTCCTCGGCAATAATTGCTTGAGCTTCCATCGCTTTCCGAAGCCTGTCCTCCTT
GTTAGCAGCCACAACCTCCTTAAGATCATCCACATTATAGACCCGAGCAGTGTCTACATCTGAGACACATGAACCCACATTCCTAGGAACGGAGATGTCA
ACGAAAAGCCTCAGACCCCCAACTTCCTGACCACCAGGTGGAAGATCCGTTACATGCTCTTTCAAAAACAAAGGGGTTTCTGAAAGGGGTTTGTAAATTA
TCTCAACACCCGTCAATTCCTCACGGATGGCAGAAACTCTCTCCTCGGTTCTGTTCACTACCACCATCTTGGTGCATCCTTTTGCTACCAAATGTTTGAT
CACAAGCTTCCCCATCTTGCCTGCTCCGATCACCAACATCCTTGCAGTAGAATGAGAGGATTCAGGAAGCTTCATCAAGGCCAACTCAACAGCAGCTGAG
CTAACGGAAACTGCCCCCGCGGCAATATTTGTCTCGGTTCTAACCCGTTTTCCAACGGTGATTGCATGCTTGAACAGCCCACTGATGTTCCTACCAAAGC
CACCGACCCCTTGCCCGACTTTGACGACTTGTTTGACCTGAGCCAGGATTTGACCTTCTCCCAGAACCAGTGAGTCTAGCCCTGCTGATACTTCAAAGAT
GTGCTGTGTAGCATCTTTGTTATACAGTAAAAACCGGTGCTGACAAATCTCTGAAAC