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Detailed information on CNT30566470


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30507162Actinidia chinensisNicotiana attenuata5.4937.4484.8179forward
CNT30509056Actinidia chinensisSolanum lycopersicum5.7741.584.3483forward

Expression of CNT30566470

Peptides detected in this lncRNA

>peptide 1 (64 aa)
MFAFVVWFVSLCFEILLPFVGTEQSQKLCSSLDLLLFFTCLITANCLYELFRCSSTPFEQVEDI*

>peptide 2 (29 aa)
MIGFLFYVFGKNANFLLCAIENLLLGIKF*

>peptide 3 (30 aa)
MDPSLLSPYLLFKWMIGLWFAYVRSFITHL*

>peptide 4 (31 aa)
MFLEADLRGLLGFFGGFFILGFDRSVFFIIS*

>peptide 5 (36 aa)
MSGASLPIFSSLFGLKGALHLPLSLSLSPMSISSKS*

Sequence

>CNT30566470
TAGGGGTCTCCCTACTTAAATAAATTAGGTCAAAGCTAGTGGTTGGTCTTTAACTTTTTACTTTTTTGTGGTTGGGAAGGGATGTTGAAGTTTTGAAGGT
GAGGTTATTTTATCTATTTATTAGGCTCTAGATGCTAGATTTTTCATGGATTTGCAAGGTTATAAGGCCTCAATGGTCCATTTGAGCTTTTAGTTTTGTT
ATGCGACGCTGTGGAGTGTGGGTTATTCTTCAGTTCTAGATGTTTCTTGAGGCTGATTTACGGGGTCTTTTGGGTTTCTTTGGTGGGTTTTTCATTCTAG
GGTTTGATAGATCAGTGTTTTTCATTATAAGCTAGTGAAGTTTTTTTCTCTTTTACGTTTCTTGTTGGTGATTTGTGGGTTATTTTTTGTTTTCATTGGT
GGGTTTTTGCTTCTAGGGTTTGAGAAGGGAGTATAGTGTTGTTTAGGGTTTGTGGGTAGTATTTAATTACTGTGGTTTTTTATGATGTTTTGTTTCAATA
TAAGTATGGATTCATGGAATTAGGGTTTGGGAGTAGAGCTCCTTGAAGTCCAATAGAGGGTCTGATTGGGAAGATTGAGCTGCTGATCTATGGATCCCTC
ACTCCTATCTCCATACCTTTTGTTCAAATGGATGATAGGCTTGTGGTTTGCATATGTCAGGAGCTTCATTACCCATCTTTAGTTCCTTGTTTGGATTGAA
GGGAGCTCTACACCTACCCCTCTCTCTCTCTCTCTCTCCAATGTCCATTTCTTCCAAATCATGATTTATTTATGTATTTTGGTAATCTAATTCTTAGATA
TTCATGAACCGGATCATTTGTGTATGTGTGTAACTTTTTTTGGGTGGTCTTTATGTTCTCTCTCATTTAGCATTCTCTCTCCAATCTCCATTTCCTAATA
ATCATTTTTCTTTTGTACTTTAGATGTTAGATCTTCAACTGGATCCTGTGTGGTATGTTTGCATTTGTTGTTTGGTTTGTGTCTTTATGTTTTGAAATAT
TGTTGCCATTTGTGGGTACTGAGCAAAGTCAAAAGCTCTGCTCAAGTTTAGATTTACTCTTATTTTTCACTTGTCTTATAACTGCCAACTGTCTGTATGA
ACTCTTCAGATGCAGCTCAACTCCTTTTGAACAGGTGGAGGACATCTAGTGAGAGAATTTAGTGAACATGATTTGTACCAATAGAAGATTTGTTACTTTG
TGGTTTTGAAGATAGTGAGAGATTAGTATTTGCAAAGCTTTCTGTGGGTGGTTTATTTCCATTTGGGATATATGTGTATTTTCATCTTGGAAGCTTTACC
TTGTAAAACATTCAAGAGATAGTTGAAAGTAATTTTTAAGTTGGATGATAGGGTTTTTGTTTTATGTTTTTGGCAAAAATGCCAACTTTTTATTATGTGC
TATTGAAAATTTGCTTCTGGGAATTAAATTTTGAAAAA