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Detailed information on CNT30565712


BLAST search results

BLAST vs Swiss-Prot:
sp|Q76H85|H4_SILLA, E-value = 7e-43

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696576Actinidia chinensisOryza sativa64.8843.0287.11194forward
CNT30670612Actinidia chinensisSetaria viridis63.8847.2887.43191forward
CNT30522839Actinidia chinensisSetaria italica68.935.2187.38206forward
CNT30546681Actinidia chinensisIpomoea triloba50.8432.3482.89152forward
CNT30703567Actinidia chinensisQuercus lobata30.7718.2292.3992forward
CNT30375418Actinidia chinensisArabidopsis thaliana27.7635.1785.5483forward
CNT3069058Actinidia chinensisQuercus suber30.7710.5188.0492forward
CNT30197514Actinidia chinensisPisum sativum28.7610.7683.7286forward
CNT30504865Actinidia chinensisNicotiana attenuata67.8939.6581.77203forward
CNT30712284Actinidia chinensisGlycine max20.7413.1991.9462forward
CNT3042757Actinidia chinensisPrunus dulcis53.1826.2482.39159forward
CNT30288901Actinidia chinensisTriticum aestivum68.943.8387.38206forward
CNT30221015Actinidia chinensisHordeum vulgare48.8327.787.67146forward
CNT30387206Actinidia chinensisTriticum turgidum68.936.9287.38206forward
CNT3086283Actinidia chinensisVigna radiata23.084.6486.9669forward
CNT30554906Actinidia chinensisOryza glaberrima64.8833.5687.63194forward
CNT30441215Actinidia chinensisAegilops tauschii68.937.1886.89206forward
CNT30252948Actinidia chinensisAvena sativa64.8837.4588.14194forward
CNT30664872Actinidia chinensisTriticum dicoccoides73.5846.8185.91220forward
CNT3059678Actinidia chinensisArabidopsis lyrata22.7414.1485.2968forward
CNT3082467Actinidia chinensisBrassica juncea46.8219.5385.71140forward
CNT30135596Actinidia chinensisLolium perenne68.955.2384.95206forward
CNT3015042Actinidia chinensisZea mays64.8832.7785.57194forward
CNT30229571Actinidia chinensisAnanas comosus64.8847.0987.11194forward
CNT30685043Actinidia chinensisTriticum urartu68.946.2985.92206forward
CNT30348363Actinidia chinensisEragrostis tef50.8427.2988.16152forward
CNT30620798Actinidia chinensisCajanus cajan52.1729.8985.9156forward
CNT30596905Actinidia chinensisOryza meridionalis64.8831.9187.63194forward
CNT30360323Actinidia chinensisLactuca sativa46.824081.43140forward
CNT30370989Actinidia chinensisOryza glumipatula46.8222.490140forward
CNT30645368Actinidia chinensisCannabis sativa42.8138.6785.16128forward
CNT3052246Actinidia chinensisAmborella trichopoda25.756.3985.7177forward
CNT3024855Actinidia chinensisPopulus trichocarpa51.8426.4181.94155forward
CNT30148252Actinidia chinensisBrachypodium distachyon42.8131.690.62128forward
CNT30101875Actinidia chinensisOryza rufipogon68.928.5786.89206forward
CNT30577582Actinidia chinensisOryza barthii64.8830.587.63194forward
CNT30581397Actinidia chinensisEchinochloa crusgalli68.935.0987.38206forward
CNT30496126Actinidia chinensisDigitaria exilis46.8220.5988.57140forward
CNT30117527Actinidia chinensisOryza nivara64.8833.6887.63194forward

Expression of CNT30565712

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MRPLIRFTPPLRASLRIAGFVIPWMLSRRTLR

>peptide 2 (38 aa)
NPHPNKFPKHFLFTPFLTARLCHKNPNPQTRRGSSPAS*

Sequence

>CNT30565712
AACCCACACCCAAATAAATTCCCAAAACACTTTCTTTTCACCCCTTTCTTGACAGCAAGACTTTGTCACAAAAACCCTAACCCCCAAACCCGTAGAGGGT
CCTCCCCTGCCTCTTGAGCGCATACACCACGTCCATGGCCGTCACGGCATCGCGAATGACGTTCTCGAGGAAGATCTTGAGCACGCCACGCGTCTCCTCA
TAGATGAGGCCGCTGATACGCTTCACTCCGCCCCTGCGAGCCAGCCTCCGGATCGCCGGCTTCGTGATCCCCTGGATGTTGTCACGGAGGACCTTACGG