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Detailed information on CNT30565226


BLAST search results

BLAST vs Swiss-Prot:
sp|O80402|DCAM_NICSY, E-value = 1e-34

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30616480Actinidia chinensisSesamum indicum31.7611.0280.14141forward
CNT30403425Actinidia chinensisBeta vulgaris30.4112.2882.22135forward
CNT30112510Actinidia chinensisFicus carica25.4522.5581.42113forward

Expression of CNT30565226

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MRKQVIEEEKEAREKTKVAISTQHHIKRRGRKSTLQTIKMVC

>peptide 2 (32 aa)
DRTVRKRVSANFRIDGIARSSFVVPHVLIMIL*

Sequence

>CNT30565226
TGATCGGACAGTGAGGAAAAGAGTATCAGCTAACTTCAGAATAGACGGGATCGCAAGAAGCAGCTTCGTTGTCCCACATGTTTTGATAATGATCTTGTAA
GGGTAAACAAAGAGACTATAGTGCACTCGGCAGGTCCAAGAAACTCATCCAACTGAGCTTTGGAAAGAGACCGAAGGCCCCTTCCTACAGGATCAGCAAA
TATGGTTGGCTCAAAAAAGGAAATTTCAAGCCTCTTTTCATAACCCTCAAATCCAATTGCGGAGACTGCCAAGGCCATGTCGACTTAACAGAATGATAAC
AGCCACAAAGAGAGCGAATGAGAAAGCAGGTGATTGAAGAAGAAAAGGAGGCAAGGGAGAAAACTAAAGTAGCGATATCTACTCAACACCACATCAAGCG
ACGTGGACGGAAATCAACGTTACAGACTATCAAGATGGTTTGCG