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Detailed information on CNT30555603

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30697749	Oryza glaberrima	Oryza sativa	38.16	72.49	99.49	195	forward
CNT30104531	Oryza glaberrima	Oryza rufipogon	97.46	97.46	99.8	498	forward

Expression of CNT30555603

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MTIILFVTVGALISSFMCCFSNSGHFCILYIYRSLHPHQNLISKVLQLRSSRKDMTGN*

>peptide 2 (52 aa)
MYLSNHQVSSQEKVILPQFYDYYLICYCWGIDIFLHVLLQQFRSFLHFVYLS*

Sequence

>CNT30555603
TTTCAGTACTCAAATATTGATTTGATAGTCTGAAATTACATCTTATATAAGTAAAACTTTGAGCTGAAATGTATCTTTCTAATCACCAGGTTTCAAGTCA
AGAAAAAGTAATTCTTCCACAATTTTATGACTATTATCTTATTTGTTACTGTTGGGGCATTGATATCTTCCTTCATGTGCTGCTTCAGCAATTCCGGTCA
TTTTTGCATTTTGTATATCTATCGTAGCTTGCATCCTCACCAAAATTTGATTAGCAAAGTGCTGCAGTTAAGAAGCTCAAGAAAAGACATGACCGGTAAC
TGAAGAAAGGTGGAGATGTTCTTTTCCTTTTGGCATTGGTTCAGATTAGCAAAATGCTGCAGTTAAGAAGCTCAAGAAAAGACATGACCAGTAACTGAAG
AAAGGCGGAGAGAGGTTCTTCTTCTGTTTCTTGGTTCGCTCTCTCTGCCCACACTGCAAGAGTGCCACCAATATCGGGCAACCCTCACCGTGTGACCTCG
TCTCATCTCAC