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Detailed information on CNT30555586

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30104268	Oryza glaberrima	Oryza rufipogon	25.13	11.47	83.33	150	forward
CNT30603966	Oryza glaberrima	Oryza punctata	29.15	56.31	97.7	174	forward

Expression of CNT30555586

Peptides detected in this lncRNA

>peptide 1 (74 aa)
MMHVQLNKDTTFSLLYSAYAMVLHAIFFFLVRKSPMKNEYCTYPLPFYLNSYDLDIFYTVSLYWGGLLSIFVKQ*

Sequence

>CNT30555586
GCATCGGCAATGGTGCAGAGGTAGGATGTGTTGATCGCAGCACAGTTGGGGATTTTTGACGTGTCTTCAGGCTGTTCTCGATGAGCTGTTAATTAAATGA
AATGTCAAGTGATTTTCTTGAACTTGATCAGACAAAGAAACTATATTAGGCGAATATTCATGACCTGTTAGTCTGAAGCGGAAGTAGAATCAGATTTAGC
AAATGCAGATGTAGAATCAGATTTTAGCAAATGCAGATGTAGAACTATCCAAGCAGATTGATCGGGCACAATCTTACTGTGCCATTGCCAGTCATCTATT
CAAGCACAGAGCAAATTTAACTCAAGATTGTGAGATGATGCATGTACAACTGAATAAAGATACAACCTTTTCTCTGCTCTATTCTGCATATGCCATGGTC
CTCCATGCTATCTTTTTTTTTTTGGTACGTAAATCACCCATGAAAAATGAATATTGCACTTATCCGCTTCCTTTTTACCTAAACTCGTACGATCTGGATA
TATTTTATACGGTCTCTTTATATTGGGGTGGCTTACTATCAATATTTGTAAAACAGTGAAATATGATTTAAATAAGCCAGTGTGATTTGAAATTAAC