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Detailed information on CNT30555377

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30597137	Oryza glaberrima	Oryza meridionalis	90.11	98.77	90.27	483	forward
CNT30104172	Oryza glaberrima	Oryza rufipogon	67.35	96.27	92.24	361	forward
CNT30578141	Oryza glaberrima	Oryza barthii	84.14	91.3	100	451	forward

Expression of CNT30555377

Peptides detected in this lncRNA

>peptide 1 (90 aa)
MAATKRMDYSITAVFMLLLIISSTFSSCYAAKDMKDREAILRRHREECKKICRDRRTYCPPEMPCCCVMNAPASSPVSVENESGDGFVIN*

Sequence

>CNT30555377
CAGATACATACAAACAAGAGCTCAGAGCTTGTTTCTTCAGTGATCTCTCCTAATGGCAGCTACTAAGAGGATGGATTACTCCATCACGGCGGTTTTCATG
CTTCTTTTGATCATCTCTTCCACCTTCTCATCCTGCTACGCTGCTAAAGATATGAAGGACCGAGAAGCAATATTACGGCGCCATCGTGAAGAGTGCAAGA
AAATATGCAGAGACCGTCGTACCTACTGCCCGCCTGAGATGCCATGCTGCTGTGTGATGAACGCCCCGGCATCATCTCCCGTTAGTGTCGAGAATGAAAG
CGGAGATGGGTTTGTAATTAATTAAATTGATCATCTCCCATCCAAATTTGTAATGGATCGATTTGTTAGTTTGATGCTATCTTAGTGTAAACATTCATGC
TTTTGTTATATTATGAACGTGGTTATATATTACTCCATGGTTTCAAACAAGGGGCAGCAGAGAAGAGTTTGAAAGTCTGAATAATTGTGTGTACCATACT
GTACCTGACGAAAGAAACAGAAGAACGTGTTTTCTT