Detailed information on CNT30555359


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39214|RPM1_ARATH, E-value = 3e-62

BLAST vs NONCODE:
NONOSAT000134, E-value = 5e-42

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697340Oryza glaberrimaOryza sativa3.2224.4791.37139forward
CNT30595670Oryza glaberrimaOryza meridionalis1.1623.369250reverse complement
CNT30370040Oryza glaberrimaOryza glumipatula4.4134.6187.37190forward
CNT30109079Oryza glaberrimaOryza longistaminata4.2422.5186.89183forward

Expression of CNT30555359

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MFIAKSFWKLTLCLVQRKVWILVEIGNDVT*

>peptide 2 (30 aa)
MEAPAKYELIFARARITSSAIFAPPPGCLL*

>peptide 3 (35 aa)
MILAPKHTKDTDRNGLIGSGRLQNICHLCLDSDRL*

>peptide 4 (42 aa)
MIHPCCDDDTTSIAKFVQYIIYNTTNCLVPHIVQYDQNFPLY*

>peptide 5 (45 aa)
MPDTVITALSGSLECIHSVSNILLFSTPTRSSSSARLGMSWDCLL*

>peptide 6 (61 aa)
MIAGGRPWHISTVAIATSWSSGGHSQSLFLKNAFLQKSSNASVMSKGKILSLRLGGAMAAT*

>peptide 7 (56 aa)
MHPNQGYPSKFITFHKLQHISVYQFHEITLRDLLCCGSSFLLHKAFSNPQAHEAFS*

>peptide 8 (35 aa)
MARSRRLSCILTKDTLRSSSLSTNCSIFRCINSMR*

>peptide 9 (36 aa)
MWWRPPGRARSDFRRGFPSFLILFFSHFDLFFFFQF*

>peptide 10 (40 aa)
MDPNFGSKHSLRSLLPKHHLNRAYELLPPSHNIRDFEFLL*

>peptide 11 (77 aa)
MDSGTSDISESFSSRTARYFDPDEIQDHISGHDVMVISSAISVRRRGNLVPVAFISQFLHADNRRTLAFASICSIVL*

>peptide 12 (77 aa)
MEGVFRKHSAKLQPNPYPLLPHISLGRSFSFWSSHSSLSPSPSSIEANLREREGKLAVHHPNPEVLALSHPDPARRR*

>peptide 13 (62 aa)
METFSVKKKIMIHSILQDSNIKYVPQCFISTCLVESILQWCLTVVNEPHHSFYFHSIDHIDL*

>peptide 14 (51 aa)
MFGSIIVLGVLINGRRHEVDIFFHGFMFVLFGFEEMKRLQGANSLETSRIF*

>peptide 15 (49 aa)
MFGHSSYSNFFKLLFILFVTYFIIYSTLSTTFCFLYLIKSLNKTSGQML*

>peptide 16 (57 aa)
MMTRLPLQSSFSTLFTIPRTASSHTSSSTIKTFLSISVLLISCLMSWISISISISSV*

Sequence

>CNT30555359
CTTCTCGATTTTGGTTTGCTTGACATCCAGAGTTTGAAGGTTGCAGAGCTTCTCTACAGACTCTGGGATTGACTTCACTTTTGTGCGCCTTAAACCGATA
TACCGTAGATTAAACAGGTTTCCTATGGATTCTGGCACTTCGGATATTTCTGAATCTTTCAGCTCAAGAACAGCAAGATATTTTGATCCAGATGAAATAC
AAGACCACATATCAGGGCATGATGTGATGGTCATCTCTAGTGCCATTAGTGTCCGTAGACGTGGAAACTTGGTGCCCGTTGCATTCATATCCCAGTTCCT
GCATGCTGACAATCGACGCACATTAGCATTTGCATCCATCTGTAGCATTGTGCTATAACCAAACCCTTGTGCTTTGGAAATAGCCATGGCGAGATCGCGC
AGATTATCATGCATCCTAACCAAGGATACCCTTCGAAGTTCATCACTTTCCACAAACTGCAGCATATTTCGGTGTATCAATTCCATGAGATAACCCTCCG
CGACCTCCTCTGCTGTGGCTCTTCCTTTCTTCTCCACAAAGCCTTCAGCAACCCACAAGCGCACGAGGCTTTCTCGTGACATAAGGTAGTCTTCAGGGAA
CAGACTGCAGTACAAGAAGCAGTTTCTGAGGTGGCCAGGCTGATTCTGATTTTGGCCTCAGAGACAATAGCCTGCCTGTGGATATGATTGCGGGAGGTAG
ACCCTGGCACATCTCTACTGTCGCCATAGCCACATCCTGGAGCTCCGGTGGGCATTCCCAATCTTTGTTTCTCAAGAATGCCTTCCTGCAGAAGAGCTCA
AATGCATCAGTCATGTCCAAAGGCAAGATTTTGAGCCTACGTTTGGGAGGAGCAATGGCTGCTACATGATCCACCCGTGTTGTGATGATGACACGACTTC
CATTGCAAAGTTCGTTCAGTACATTATTTACAATACCACGAACTGCCTCGTCCCACACATCGTCCAGTACGATCAAAACTTTCCTCTCTATTAGTGTCCT
CTTAATTTCTTGTTTGATGTCGTGGATATCCATATCCATATCCATATCCAGTGTTTGATAGTTGGAGCTAATCCTCAAAAGCAGCTTCCTCAGCAAATTC
TCCACAGTGTAGGTTTGGGACACGACAAGCCAAGCAGAACATTCGAACAATATCTTCTCCCGTTCATACACAATCTCCGCCAAGGTGGTCTTTCCCAATC
CACCCATGCCTGACACCGTTATCACTGCGCTGTCCGGTTCTTTAGAGTGTATCCATTCAGTCAGTAACATTCTGTTGTTCTCCACTCCGACAAGATCATC
TTCCTCAGCAAGATTGGGGATGTCTTGGGACTGTTTGCTGTAGGGGCCGCCATGTTGATCAGAAGGAATAAGCTGGTAAGAATTCAACCATTGGTCCTTC
AATTTTGAAACAACCTCGACTTCTTTCTCTATCTCAGTTATCTCATCAGCAATGCCTAGAAAACATGATCTTTTCATGACCAGCAGCATCTTCACAAAAT
ATTTCCCCTCCAGCTGAAGAGTGTGGTATGAATAATTGTCCATCACATCAACAACATGGTAGGCTAAATTTCTCACATGCCTGATCCATTCATTTAGGAG
ATCATCATTGAGATAGGATGTGCCAATCTGCCGTATAACATTGTCCATCATAGACAATTGTATCTGAATTCGTCTAATCTTCCCTGGCAATTCTTTCAGA
ACTGAACTTTCTTCAGAAAACTTTGATATGGAAGCTCCAGCCAAATATGAACTTATCTTTGCAAGAGCAAGAATCACCTCTTCAGCCATTTTTGCGCCCC
CACCAGGTTGTCTGTTATAAATAAACGATCCACCTCACGAACTATCCAATTCAGTCTCTTATTTTCTGCTGGCAGGAAAATGGAGAGGTCAATATGGAAA
CGTTTTCGGTAAAAAAAAAAATTATGATCCACAGTATTTTACAGGACAGCAATATAAAATATGTTCCACAATGTTTCATATCGACCTGTTTAGTAGAATC
AATTTTACAGTGGTGTCTAACGGTAGTAAATGAACCGCACCATTCATTTTATTTTCATTCAATAGACCATATCGATTTATAGCTTTCTTTTTTCTTTCTT
TTCTTATGGACTGTATCGATCTATGCTACCGTCTCAACTACTGGTAGTACAAAATGTGTTGTATAACTCATAAATCAACGGTTAAGACACTTGTACTGGT
GATAATACCAATATTAGAATATTAAGACCACCGTTAAGAGTTGGACCTCCCACAATAATGAAAAAACAATGCCTTAACAAAGTTAAATCAAGCAGTGCAC
AAGCAATTAGGATGTGATGGAATGATTCTAGCTCCTAAGCACACAAAGGACACAGATCGGAATGGTTTAATTGGATCTGGGAGGTTGCAGAACATTTGTC
ATTTGTGCCTGGACTCCGATAGGCTGTGAGCATCCGCCACCTGCAGATCTGCTGGCGAGGGTAGATTAGGTGACCAACAATGTAACTGTGCAGCAAAGGC
GAAGATGGTAATATACTGATATTGTTCTAAATACTCTAGTATTTGAATAGGGGTGTCTGATCTGGAGATTAATAAACATCCTTCGAAGGATTCACTGTTG
TTTTATGTGCCCAATATTTTCGAGCAAAAAAACTAATAACCTCTTTCTTCTAGGAGGAAAAATCTAACCAAGAACGGCAGAACTTTTGAGCAGACAAAAA
CAGAAAAACTATTCGAGAATTAGAACTCAACAAAAAGGAAGATTCAGTTCAGATGTTCGAGCTGCAAACCTGAGAGCAGCAAGACGAATCTTTTGAGCCT
AATTAAGCCGTCATTAGCACACGTGGGTTACTGTAACACTTATGGTTAATCATGGACTAATTAGGCTCAAAAGATTTGTATCGCGATTTACATGCAAACT
GTGTAATTAGTTTTCATATTTATCTATATTTAATACTTTATACATGTGTCCAAAAATTCGATGTGATGTTTATTGCGAAAAGTTTTTGGAAACTAACGCT
GTGTCTAGTTCAGCGTAAAGTTTGGATTTTGGTTGAAATTGGAAATGATGTGACTTAAAAGTTGTGTGTGTATGACAAGTTGATGTGATAGAAAAAGACT
GAATTATGGATCCAAACTTTGGATCTAAACACAGCCTAAGGTCCCTTCTTCCCAAACACCACCTAAACAGGGCCTATGAATTACTCCCTCCGTCCCATAA
TATAAGAGATTTTGAGTTTTTGCTTTAAATGTTTGGCCACTCGTCTTATTCAAATTTTTTTAAATTATTATTTATTTTATTTGTGACTTACTTTATTATC
TACAGTACTTTAAGCACAACTTTTTGTTTTTTATATTTAATAAAAAGTTTAAATAAGACTAGTGGTCAAATGTTATAAGAAAGAACTTAAAATCTTTTGT
ATCGTGGGATGGAGGGAGTATTTAGAAAACACAGTGCAAAACTGCAGCCAAATCCTTATCCTCTTCTCCCCCATATCTCACTCGGTCGGTCCTTCTCGTT
CTGGTCGTCTCACTCATCGCTCTCCCCTTCCCCCTCATCCATTGAAGCTAACTTGAGAGAGAGAGAGGGAAAGCTTGCCGTCCACCATCCAAATCCGGAG
GTATTGGCCCTGAGCCATCCAGATCCAGCGCGGAGGCGGTGAAGGTGGCAGGGGCACGGGTAGATGATGCAAGATTGAAAACAGCAAAGGTGCGGACAAC
TGAGCGCTTTGTCCGGCGTTGTTGCAATGCATCCAACTCCAAGATGAGAGGGCGTGGTGGACTTGTCAACTAACCAGATCTGACAGGGAAGCGCTCGATA
GCAGTGGCTCGGCTAGCACATAGTGCTTGGGGACGACAACAACTGAAATGTGGTGGCGGCCGCCTGGTAGGGCGAGGAGTGATTTTCGCAGGGGTTTCCC
CTCTTTTTTAATCCTTTTCTTCTCACATTTTGATCTCTTCTTCTTTTTTCAGTTTTGATCGAATGAAGACGACAAGAAGTGAAGACCTCTTTGTATGCTT
TGATGTTTGGGAGTATCATTGTTTTGGGGGTTTTGATTAATGGAAGAAGACATGAAGTAGATATATTTTTTCATGGTTTTATGTTTGTTTTGTTTGGATT
TGAAGAGATGAAGAGATTGCAAGGGGCAAATAGTTTGGAAACCTCTAGAATATTCTAGTGATGAATTTGTTTTCTAGGTTTATTTATGTTTTACTATCGG
TAATTCTCTTATATTTATCTTAATCTCTAACTCTGTCACGTGGCCTAATAAGCCCCTTTTTTTCCCTTTTGTAATTCGTTCTGCCCCTATATAAGGCACT
GGATGTGTTTTGT