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Detailed information on CNT30554809


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695918Oryza glaberrimaOryza sativa70.2776.0699.3286forward

Expression of CNT30554809

Peptides detected in this lncRNA

>peptide 1 (93 aa)
LSSPRHRSPRSVPRPCTLFLFLLLLLSLEALNSFSSQNFLSHSQGQLCCRFVVVVPLLLHHSTAGTPLIGTRFDALTCPRSPPELPLPCPVSP*

Sequence

>CNT30554809
CTGAGCTCGCCTCGCCATCGATCTCCCCGGTCGGTTCCTAGACCTTGCACTCTTTTCCTTTTTCTCCTTCTTCTTCTTTCCCTGGAAGCGTTAAACTCGT
TTTCATCCCAAAATTTCCTCAGCCACAGCCAAGGCCAGCTGTGTTGCCGATTCGTCGTCGTCGTCCCTCTGCTGCTGCACCACAGCACCGCAGGAACACC
TCTCATCGGAACACGTTTTGACGCACTCACCTGCCCGCGTTCGCCACCGGAGCTGCCACTTCCATGCCCGGTGTCACCATAGCTCCCGATCTGGAACTCG
CGTTCCGATGATGTTGAAGATTCCACCGGACTCACAGGAACTGAAGTGGACCTAGAAGGCTACGCTGAAGCTTCGGAAGGCCACCTTCCACAAGGCAAGC
CACAGTT