Detailed information on CNT30552964


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30116682Oryza glaberrimaOryza nivara88.0145.3499.23389forward
CNT30550459Oryza glaberrimaOryza brachyantha22.174.2385.7198forward

Expression of CNT30552964

Peptides detected in this lncRNA

>peptide 1 (30 aa)
KQLFSTGADGGFGWYLEKASTVPGQLRTEP*

Sequence

>CNT30552964
AAACAACTGTTTTCGACTGGGGCGGACGGAGGATTTGGGTGGTATCTGGAAAAGGCTAGTACCGTCCCCGGTCAATTAAGGACCGAGCCATGAAGTTAAG
CATGAAACGACCCCCGTACAACCGTACTTCTCGAATGGGTATAGACCTAGCGGATTAGATAGCCGAGCGGAGGCAGTATCCCTGCATAGATGGTTCACCC
CTGAGTGAGGCAGGTGCGCTACGGTGGGACACCCGTTGAGGTAGGGCCGAGAGGCGTGCCCTACATCGGTGTCGCCATTGGTAGGACTGCCATGAGTGTG
TGAGAGAGAGAACTTAACTTGAACCATAATTTAATATGTGTGTGAGACTTCTCTTTCCCGGGAGCGCTAGAACTCCTCTCACTGCTAGAAACATGGACGC
CTAGAGTGCATGAGGATTTAAGTTCATGGAGCGGGTACTGCC