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Detailed information on CNT30552872


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8H1E4|RAP24_ARATH, E-value = 2e-18

BLAST vs NONCODE:
NONCSAT000606, E-value = 8e-13

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30463936Oryza glaberrimaSaccharum spontaneum12.3620.3382.11123forward
CNT30368632Oryza glaberrimaSorghum bicolor9.2525.6385.8792forward
CNT30105771Oryza glaberrimaOryza longistaminata37.0973.6598.37369forward
CNT30100504Oryza glaberrimaOryza rufipogon59.377.5398.81590forward
CNT30575459Oryza glaberrimaOryza barthii59.385.2698.98590forward
CNT30115967Oryza glaberrimaOryza nivara59.353.4498.31590forward
CNT30603672Oryza glaberrimaOryza punctata75.1851.5593.85748forward

Expression of CNT30552872

Sequence

>CNT30552872
CACAACTACACATATATCATAGATCAGACAAGCACGTGAGAAAGGTACATATAGTTACATAAGCTACTGAATTTCCAACATGTAACAAGGGATTACAGCT
TAATTCTCGACCGGCCGCGCCGTGAAAAAAACAACCGGCAGCTCAACCAGGAGATCAGATCACTGAGTACACCAACGACACTTGCACGACGACGTAATAC
CAACGACCTTACTACTACTGAGTACTGACTAGTTACTGCTACTCGCAGCAGCCATGGCCGACGTCTAAAATGCCACCGAGCCATGGAAGCCACGGAATTC
AGAGAAGATTACACAGCTAGTTGAGTTGAGTGCCTCTAGCTTGACGAAGACTACTACTAGTACTAGTAATAGACTAGTAGTAGCTGCTTCTGCTTGTTTA
TGAGAGGATTGAGTCCCAGTCGATCTCCCAGGACGGGTACTTGCGCAGGTGGAATGTCTCCGACTCGTCCCATGGCGCCTCCGTGAAGTCCAGCTTCTCC
ATCTCCGGCACCGGGGGCGACAGCGGCGGAGGAGGGGAGCCGGCGGACACCGAGTCCTCCCCTTCCGTCGACGCCGAGCACTTGGGGGACTCCGGCTCCG
CCGCGGAGGCGGAAGGCGGCCTTGTCGTAGGCGAGCGCGGCGTCCTCGGCGGTGTCGAAGGTGCCGAGCCACAGCCGCGTCCGGTTCTTCGGGAGGCGGA
TCTCCGCCACCCACTTCCCCCAGTGGCGCTGCCGCACTCCGCGGTAGAGCTTCGACTGCGCCGCCCCGGCGACCGCCGCGAACGGCCCCGCGCGCGGCGG
CGACCCGGACTGCTTCATCGGCTGGCCACGCGGCCGAAGGAAGGCGCCGGCCAGGGCCCTCTGCTGCTGCTGCTGGGCCAAGAACTGGGCCTGGATCTGC
TGGATCTGGGCTGGGCCCAGGTGGGTCAGCCCCATCGGCCCGTTCGTCGCCGACGCCGCAGGTGAAGCAGCATGATACTGCGAAGAGTACAGCGG