Detailed information on CNT30552641


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30100261Oryza glaberrimaOryza rufipogon59.518.1498.32119forward

Expression of CNT30552641

Peptides detected in this lncRNA

>peptide 1 (56 aa)
SFIDGRIEGCSPVQITASVNTSNASSTWVGSLIPSSRRSTDKPYSWYCLHAHCAKQ*

>peptide 2 (31 aa)
MLPSTNHSKCKHLQCVLNMGWVSDPLIEKIN*

Sequence

>CNT30552641
TCTTTCATTGATGGCCGCATTGAAGGATGCTCCCCAGTACAAATCACAGCAAGTGTAAACACCTCCAATGCGTCCTCAACATGGGTTGGGTCTCTGATCC
CCTCATCGAGAAGATCAACTGACAAACCATATTCTTGGTACTGCCTCCATGCCCATTGTGCCAAGCAATAGTACTCTCCACCATCATTTGCCACTCGACC