Detailed information on CNT30552458


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690756Oryza glaberrimaOryza sativa61.2387.28100199forward
CNT30369262Oryza glaberrimaOryza glumipatula94.4695.9499.02307forward
CNT30115689Oryza glaberrimaOryza nivara10099.6998.15325forward

Expression of CNT30552458

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MVVCSVVCIISIAQAAEKGMILFRHLPTPKVNGVKILGGLHGGGVDDVD

Sequence

>CNT30552458
AAGATGCAAAAACCTTAAACCTCACTAGACATTGCAGACCATAACACAGAGAAACCAGAATTGATGCCTGATTCATCAGACTGATATGCCAGCACGAATA
GGTGAAGGGACCAGTGAAATCTGATCTGAAACTCACATGATAATAACTCACGACAAAAGGAGCTAAACATTATTGGTATGGTAGTATGTTCAGTGGTGTG
CATTATTAGCATTGCTCAAGCTGCAGAAAAAGGTATGATCCTCTTCAGACATCTTCCCACGCCGAAGGTGAATGGGGTGAAGATCTTAGGCGGACTTCAC
GGTGGCGGAGTTGATGATGTCGATG