Detailed information on CNT30551951


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30577934Oryza brachyanthaOryza barthii21.84.298875forward

Expression of CNT30551951

Peptides detected in this lncRNA

>peptide 1 (40 aa)
EKSIKPLQELTWTQTTALKLPENHILQGKPRNHPLIILRT*

>peptide 2 (64 aa)
KVYQTVAGADVDPDDCIEAPRKPHIARQATKPSFDHLENLSREPLSYFTHYLLAKLFWRILTFK*

Sequence

>CNT30551951
GAAAAGTCTATCAAACCGTTGCAGGAGCTGACGTGGACCCAGACGACTGCATTGAAGCTCCCAGAAAACCACATATTGCAAGGCAAGCCACGAAACCATC
CTTTGATCATCTTGAGAACCTAAGTAGAGAACCACTTAGTTATTTTACGCATTATTTACTTGCAAAGTTATTTTGGCGTATTCTTACTTTCAAATAACCA
TGTTACATTAGTTATCGCGTTGTACTTAATTTACTATTATTGCCGATACCATAAACCACCATACCCTGTTCCCTGATAACCTAGGTATAGGATGAACAAT
TCATCAGATTAATATTATAGTGGATAATAGTACCAAACTTCTAC