Detailed information on CNT30551414


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694830Oryza brachyanthaOryza sativa37.3213.7595.28106reverse complement
CNT30243125Oryza brachyanthaAvena sativa256.8488.7371reverse complement
CNT3067791Oryza brachyanthaLeersia perrieri31.3411.2487.6489reverse complement
CNT30102405Oryza brachyanthaOryza rufipogon37.3215.5496.23106reverse complement
CNT30576947Oryza brachyanthaOryza barthii37.3211.1594.34106reverse complement

Expression of CNT30551414

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MATWSKASLIIAAIFLLSLSCSASGVAHGRRSSSSSRRLVRSYDEPCKKMRLYLHDILYDYSNSTANSTAAA

Sequence

>CNT30551414
GCAAGCAGCAAACCCATAATTAAACACTAGCTAAGTAGCTAAGCTAACCTAGTTAAGCTAATCAGGCCATGGCTACCTGGTCCAAGGCGTCTCTGATCAT
CGCCGCCATCTTCCTGCTCAGCCTGAGCTGCTCGGCGAGCGGCGTCGCGCATGGCCGCCGGAGCAGCAGCAGCAGCAGGAGGCTCGTCAGGAGCTACGAC
GAGCCGTGCAAGAAGATGAGGCTCTACCTCCACGACATCCTCTACGACTACAGCAACAGCACGGCGAACTCCACGGCGGCGGCG