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Detailed information on CNT30547182


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 2e-125

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-72

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30165865Ipomoea trilobaPistacia vera69.0779.5584.98739forward
CNT30120046Ipomoea trilobaCitrus clementina68.7963.2882.88736forward

Expression of CNT30547182

Peptides detected in this lncRNA

>peptide 1 (82 aa)
MVSELSTSRVIVFPVRVLTKICICTNPNFLQITQKLKSKFHYTIIDSIPIFPPKNHQILQSETERTPQIFKRERTIQQYTKF*

>peptide 2 (30 aa)
MVLPVRVLTKICMPPLKRSTRWRVDSFWML*

Sequence

>CNT30547182
TGAATACTTAAGATAGGTAACTTTTATTATCATTCAGAAGGGAACATCAAACAGCAGATAACAGATACATTTTTGGCAGTGACACAAACATCATTGCTAG
TTGTTGCTACATAAGGTAGACTCCTTCTGGATATTGTAATCAGCCAGGGTCCTTCCATCTTCCAATTGCTTCCCTGCAAAAATCAACCTCTGCTGGTCTG
GGGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCTATTGTGTCCGAGCTCTCAACCTCAAGAGTAATGGTTTTTCCAGTGAGGGTCTTCAC
GAAGATCTGCATTCCACCGCGGAGCCTGAGCACCAAGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCGGCGAGGGTACGGCCGTCCTCGAGCTGTTTT
CCGGCGAAGATAAGTCTCTGCTGATCTGGGGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATTATCAATTGTGTCTGAGCTTTCAACCTCCAGAG
TGATGGTCTTGCCGGTTAGGGTTTTGACGAAGATTTGCATGCCTCCTCTCAAACGGAGCACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGC
GAGGGTGCGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATTAGCCTCTGCTGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGCGAGGGTACGGCCGT
CCTCGAGCTGTTTTCCGGCGAAGATAAGCCTCTGCTGGTCCGGGGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAACT
CTCCACCTCGAGGGTGATAGTCTTTCCGGTTAGGGTTTTGACGAAGATCTGCATCTGCACAAATCCAAACTTTCTTCAGATCACACAAAAACTCAAATCA
AAATTTCACTACACAATTATAGATTCAATTCCAATCTTTCCCCCAAAAAATCACCAGATTTTACAATCAGAAACAGAAAGAACACCGCAAATCTTCAAAA
GAGAACGAACAATACAACAATATACAAAATTTTAAAAACTTTAAAAATAAAAATTAAAGGAGAAATCAAT