Detailed information on CNT30546481


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30379731Ipomoea trilobaManihot esculenta31.1516.3182.32181forward
CNT3091587Ipomoea trilobaSolanum tuberosum16.726.2990.7297forward
CNT30597992Ipomoea trilobaFraxinus excelsior17.2128.6586100forward
CNT30713316Ipomoea trilobaMalus domestica golden31.8419.8583.78185forward
CNT30621504Ipomoea trilobaCajanus cajan31.6711.6880.98184forward
CNT30571093Ipomoea trilobaVitis vinifera17.0423.6886.8799forward

Expression of CNT30546481

Peptides detected in this lncRNA

>peptide 1 (94 aa)
GKEKGHTLTARKLNCYSSIVDPILFLKLNCAISLVFWNSGGAFLLTPSAFTVNDVGSKQNFFALYLPGLNAKLSTPPSIVGHWLAVPDPFTSKL*

Sequence

>CNT30546481
ATGGTAAAGAGAAAGGGCACACGCTCACCGCCAGGAAGTTGAACTGTTACAGCAGCATAGTCGATCCCATCCTTTTCCTCAAACTTAACTGTGCCATCAG
CTTGGTGTTTTGGAATTCTGGCGGGGCATTCTTGCTCACACCCTCAGCCTTCACAGTGAATGATGTTGGCTCTAAACAGAACTTCTTCGCATTGTATTTG
CCTGGCTTGAACGCAAAGCTGTCAACACCCCCTTCAATCGTCGGGCACTGGTTAGCAGTTCCAGATCCCTTCACTTCCAAGTTATGAAGAAGTTATAGCA
AAGGTGAAAGTTAGAACATACTGAGACAACAAGGGCAGAAGTGGCAAGAGCAAAGCCAGCAACTTTGGCAGCATCAGAGCACCTCTGAGCCAAGTCCTTG
AGATCAGCCTGCAGGGAGCAAGTGAGCCTGGAAGTGCCCGGTTCGACGCCAAAGGCTTTGCTGACACTCAGAGCAGACCTCAACTGGTTAGTGCTTCTTC
CTTGAACACCAACCTTGGCTGGTTGCATAAGAGTTGCAGCTGCTTGTAGTGAGGCTGCCATTGTTTTTTTTGTGGTTTTGA