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Detailed information on CNT30534827


BLAST search results

BLAST vs Swiss-Prot:
sp|P38460|YMF17_MARPO, E-value = 1e-19

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30513302Eucalyptus grandisJuglans regia34.417.0885.94128forward
CNT3019915Eucalyptus grandisCitrullus lanatus21.2423.1792.4179forward
CNT30687283Eucalyptus grandisTriticum urartu43.8211.1589.57163forward

Expression of CNT30534827

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MIIKGSGKPAVILWKSTVLFVFELAFLNPFIRSFIYLPTNR*

Sequence

>CNT30534827
AACATCTTTGATTATGATTAAAGGGAACAATCTCAAATAGACCAAGATCAAATTGCGGGTCATTTCTTGGTGGATATAATCTGCCATAATCTCTTTGATT
CCTTCATTTATATGCCAGAATAGAGAGAGATTTGATAGGAAAGTGGAAGAGACCTTTTTGTATATGATAATCAAAGGGAGTGGTAAACCTGCAGTCATTC
TTTGGAAAAGCACGGTTCTCTTTGTCTTCGAGCTCGCATTCCTCAATCCATTTATTCGTTCCTTCATATACCTCCCCACCAATAGATAGATACAAATAGG
AATAACTGAACCACATCTCCAAAATGCTAGTACCATGCAGCGGCTTCAAAGCCAACGTGATGCTCCTTGGTC