Detailed information on CNT30534146


BLAST search results

BLAST vs Swiss-Prot:
sp|Q49KZ4|NDHK_EUCGG, E-value = 7e-42

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30201720Eucalyptus grandisPisum sativum78.7919.4281.87182reverse complement
CNT30637234Eucalyptus grandisCapsicum annuum36.89.9184.7185reverse complement
CNT30354106Eucalyptus grandisEragrostis tef42.4211.1586.7398reverse complement
CNT30723531Eucalyptus grandisLupinus angustifolius92.648.7783.64214reverse complement

Expression of CNT30534146

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MKSELGLKKKIGVLLPITSFMFDTVFILEIMIKDYSINHHLLQRYLLKHFSNTKVQYLPTN*

Sequence

>CNT30534146
GAAAATAGCGCTAGAAATCTATGAAGAGCGAATTAGGTCTCAAGAAGAAAATCGGTGTTTTACTACCAATCACAAGTTTCATGTTTGACACAGTATTCAT
ACTGGAAATTATGATCAAGGATTACTCTATCAATCACCATCTACTTCAGAGATACCTTCTGAAACATTTTTCAAATACAAAAGTTCAGTATCTTCCCACG
AATTAGTGAATTAGGCAGCATTCCTTTGTAT