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Detailed information on CNT30526828


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730504Phaseolus vulgarisCorchorus capsularis72.4185.0696.431008forward

Expression of CNT30526828

Peptides detected in this lncRNA

>peptide 1 (87 aa)
MEQCRQGKSAKWIRNLGKRIGSEGWARGSQSRTRRLSVDCSSCSRGESGSSRAGRGTDWERALRGLFPGRRTVNSELVRTRGIRLFN*

>peptide 2 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGGISGERRPC*

>peptide 3 (30 aa)
GSSKYSNENFEGRRGERFHVNGTCTWVSRS*

>peptide 4 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERAWRNQRGKKTLLSLTLVRLCEMT*

Sequence

>CNT30526828
GGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTAAGGGACGG
GGGAAGCCCGTCTGATAGCGCTCCGAGCGCGTACTCCGAAAGGGAATCGGGTTAAAATTCCTGAACCGGGACGTGGCGGCTGACGGCAACGTTAGGGAGT
CCGGAGACGTCGGCGGGGGCCCCGGAAAGAGTTATCTTTTCTGTTTAACAGCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGG
AAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCTCCCACGCCCGGTCGTACTCATAACCGCA
TCAGGTCTCCAAGGTGAACAGCCTCTGGTCGATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCTGAG
GGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTCGGTGGACTGCTCGAGCTGCTCCCGCGGCGAGAGCGGGTCGTCGCGTGCCGGTCGGGGGA
CGGATTGGGAACGGGCCCTTCGGGGCCTCTTCCCCGGGCGTCGAACAGTCAACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAA
AGCATTGCGATGGTCCCTGCGGATGTTGACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCG
GGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTAT
CCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCGGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAG
AGGTGTAGGATAAGTGGGAGCTGGAAACAACGAAAGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTGAATCGGAAGCGGGGCGCTGCCCC
TCTTTTTGGACCCAAGGTCGGCTTCGGCCGGTCGATCCGGGCGGAAGACATTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGAA
ATCCTAACAACAAGAACCTGTGGATGGATTGTTGTCGATTCCTCAACTAACCAGTTCCAGTTTCACCCCGCGAGTGTCTTGTACTGTACCAAACACACAC
CGCTCAAGTTCTCCGCCTGTTCTTTATCGGGGCTGTCCGAGAGAGAGGTTCCTTCCTAACACATTGAAAATTTAGTAATTATGAAGACCAGG