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Detailed information on CNT30526697


BLAST search results

BLAST vs Swiss-Prot:
sp|Q1S9I9|H2B1_MEDTR, E-value = 5e-56

BLAST vs NONCODE:
NONGMAT000269, E-value = 6e-103

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693619Phaseolus vulgarisOryza sativa48.6720.2288.28128forward
CNT30674774Phaseolus vulgarisSetaria viridis52.4723.2787.68138forward
CNT30523103Phaseolus vulgarisSetaria italica49.0519.0886.82129forward
CNT30315505Phaseolus vulgarisCorylus avellana68.0639.1788.27179forward
CNT30518188Phaseolus vulgarisJuglans regia74.1422.1387.18195forward
CNT30632073Phaseolus vulgarisVigna unguiculata84.0329.3996.83221forward
CNT30163372Phaseolus vulgarisPistacia vera94.343.0680.24248forward
CNT30180643Phaseolus vulgarisSecale cereale74.1423.5884.1195forward
CNT30301510Phaseolus vulgarisTriticum aestivum49.0525.5489.15129forward
CNT30220711Phaseolus vulgarisHordeum vulgare68.4417.3784.44180forward
CNT30383318Phaseolus vulgarisTriticum turgidum48.6713.9387.5128forward
CNT30565715Phaseolus vulgarisActinidia chinensis98.8633.1284.62260forward
CNT3086649Phaseolus vulgarisVigna radiata65.7823.1989.6173forward
CNT30510004Phaseolus vulgarisSolanum lycopersicum31.1826.8987.882forward
CNT30552407Phaseolus vulgarisOryza glaberrima48.6718.4486.72128forward
CNT30443203Phaseolus vulgarisAegilops tauschii74.1429.7383.59195forward
CNT30240953Phaseolus vulgarisAvena sativa49.8119.7989.31131forward
CNT30668428Phaseolus vulgarisTriticum dicoccoides74.1434.8884.1195forward
CNT30447591Phaseolus vulgarisSaccharum spontaneum49.0523.6786.82129forward
CNT303693Phaseolus vulgarisZea mays49.0537.3987.6129forward
CNT30231835Phaseolus vulgarisAnanas comosus47.5319.2389.6125forward
CNT30684130Phaseolus vulgarisTriticum urartu49.0517.7987.6129forward
CNT30722188Phaseolus vulgarisTriticum spelta74.1428.5584.1195forward
CNT30346527Phaseolus vulgarisEragrostis tef40.6850.7186.92107forward
CNT30363575Phaseolus vulgarisSorghum bicolor45.2512.9187.39119forward
CNT30619778Phaseolus vulgarisCajanus cajan52.4720.8589.13138forward
CNT30596761Phaseolus vulgarisOryza meridionalis48.6716.284.38128forward
CNT30360078Phaseolus vulgarisLactuca sativa92.7830.8184.84244forward
CNT30369169Phaseolus vulgarisOryza glumipatula76.0534.982200forward
CNT30429187Phaseolus vulgarisPapaver somniferum92.7823.4282.38244forward
CNT3052765Phaseolus vulgarisAmborella trichopoda52.4727.1785.51138forward
CNT30108786Phaseolus vulgarisOryza longistaminata28.522.228875forward
CNT30327286Phaseolus vulgarisAsparagus officinalis66.1619.2586.78174forward
CNT30149313Phaseolus vulgarisBrachypodium distachyon25.8619.4885.2968forward
CNT30101075Phaseolus vulgarisOryza rufipogon52.0919.5485.4137forward
CNT30574682Phaseolus vulgarisOryza barthii48.6718.7186.72128forward
CNT30496069Phaseolus vulgarisDigitaria exilis49.0516.1787.6129forward
CNT30557628Phaseolus vulgarisPanicum hallii45.2521.3687.39119forward
CNT30724478Phaseolus vulgarisLupinus angustifolius94.6841.2984.34249forward
CNT3065708Phaseolus vulgarisSelaginella moellendorffii48.6736.8985.94128forward

Expression of CNT30526697

Peptides detected in this lncRNA

>peptide 1 (34 aa)
ALVPSDTACLANSPGSTSLTAVWISLEVMVGFLL*

Sequence

>CNT30526697
CAGCCTTGGTACCCTCAGACACAGCATGTTTGGCCAATTCTCCGGGCAGCACAAGTCTGACCGCAGTTTGGATTTCCCTTGAAGTGATGGTGGGTTTCTT
GTTGTAGCGGGCAAGTCTAGAAGATTCCTGAGCAAGCTTCTCAAAGATGTCGTTGATGAAACTGTTCATGATGCCCATGGCCTTGCTGGAGATACCAATG
TCAGGGTGAACCTGCTTTAGAACCTTGAAGATGTAGATCTTGTATGTCTCCACACTCTTCTTG