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Detailed information on CNT30522899

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30675245	Setaria italica	Setaria viridis	27.83	90.23	100	194	forward

Expression of CNT30522899

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MSASGSRPSGRCTSESSSVDFSAHSAAPWYTSAPARCSSMACDPMGGFGSRPGEIRRVWAGWGFRRGGGE

>peptide 2 (38 aa)
MSERAVTSDAYETWRPICLKVWVRAFFWRSQTKPVDRL*

Sequence

>CNT30522899
TTACCATTTCATTCATAAATAAATAGAACACATAAATTAAGCAAGCAGCAGTACAGACTTCATTATTCAGAAGAACAGTCGTATAGCATAGCAATTACGG
CCAGCAGTAGTAGTAAAAAGCAGGCAGTTAACCACGATAAAAGCACTCCACTCCACTCGACGGCGCCACCTCACTTACCGCTGACGGCGGCGGCGGCCTC
GTTGCCCCCGTTGGCTGCCGCGGCGGGTGCCTCCTTGCCCACGGGCTTGCCGCCGTCGTCGCCACCCTCCTTGGCGAAGGCGGAGGCGGGGTATGTCCTG
CCGAGCCCGGTGGGGGTCTTGAAGGTGATCTTGGAGGGGTCGTCCTTGTCGAGGAACATGTCGGAGAGGGCGGTGACCTCGGACGCGTACGAGACCTGGC
GCCCGATCTGCTTGAAGGTGTGGGTGAGGGCCTTCTTCTGGCGGAGCCAGACGAAGCCCGTGGACCGGTTGTAGCCGACCTCCTCCATGTCGGCGAGCGG
GAGCAGGCCCAGCGGGAGGTGCACCTCCGAGAGCAGCTCCGTGGATTTCTCCGCGCACAGCGCCGCGCCGTGGTACACCTCCGCCCCCGCGCGGTGCTCC
TCGATGGCCTGCGACCCCATGGGTGGATTTGGATCGAGGCCGGGCGAGATCAGGCGAGTCTGGGCGGGCTGGGGATTCCGGCGAGGTGGCGGGGAAT