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Detailed information on CNT30521444


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673726Setaria italicaSetaria viridis77.56100100394forward
CNT30216754Setaria italicaKalanchoe fedtschenkoi19.0922.0582.4797forward
CNT30596912Setaria italicaOryza meridionalis19.0923.1587.6397forward

Expression of CNT30521444

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MLVPLQHSAASEAEHPSQCSACRRRCPSW*

>peptide 2 (48 aa)
MPAAMPFMVRMSVSSSPGPYSLAGLSFTIPRGWLPSAMVLSPQSHRDL*

>peptide 3 (30 aa)
MNESQGVNHKETHPHAGAFTALCSERSRAP*

Sequence

>CNT30521444
TAAAATCCAAGCTTAGTGAGATGCTTTGGGTTGAGCAGGGGGTATCTTATTGGAATAAATATCTTTATTAAATATAACATGCCAATAGTTTGTGGTCTTT
ATATTATTACAGAATTACAGAATGCTTAAACAGCCAAGAAGTTCCACTTGATCTTTACATCAAGCCTTATTCGAAAAGAAAACATGAACGAAAGCCAAGG
TGTGAATCATAAAGAAACACATCCACATGCTGGTGCCTTTACAGCACTCTGCAGCGAGCGAAGCAGAGCACCCTAGCCAGTGTTCTGCATGCCGGCGGCG
ATGCCCTTCATGGTGAGGATGAGCGTGTCCTCCAGCCCCGGCCCGTACTCGCTCGCCGGGTTGAGCTTCACAATCCCGCGCGGCTGGCTCCCGTCGGCGA
TGGTCTTGTCACCACAGTCACACAGGGATTTGTAGCACAGCTCAAGGGGCTCCAGGAACTGACCAAATTTGAAGGGTTCCACAGTGACATTAGTTAAACT
ATATTATG