Detailed information on CNT30519028


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30374088Juglans regiaArabidopsis thaliana48.3765.3796.221112reverse complement
CNT30730504Juglans regiaCorchorus capsularis51.59100.0897.131186reverse complement
CNT30526827Juglans regiaPhaseolus vulgaris55.1599.7696.691268forward

Expression of CNT30519028

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MALGPRDFQGPPGAHRTPREVRCSSSRWTLPPAEPFPGWAGC*

>peptide 2 (38 aa)
MCRPSQTPHLTMSSARIGPPKRALGPKRGAMPRLRFTE*

>peptide 3 (53 aa)
MSTTGRGWHSVLRIFKGRRGRTGHHAKCGALPAAGPYLRLSRFQGGQAVKQKR*

>peptide 4 (42 aa)
MALGPPDFQGPPGAHRTPREVRCSSSRWTLPPAEPFPGWAGC*

>peptide 5 (43 aa)
MIRFSGLLATLPAANRPHRLDPNTSPDHSIGGSDGRCVQRAGT*

>peptide 6 (77 aa)
HRSFCWAGIDNDPSAGSPTETLFRLLLPLNDKVQWTSRDVAGSEPPTSPRSEHFTGPFNRWERRAVCTKGRDVVNAS*

>peptide 7 (86 aa)
MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWHLPRRPGIGRALQRHPFSGLVDSAGELLHTP*

>peptide 8 (49 aa)
MKFQRLPGPVGQGYKLATLSRFVFVLEIRIKRAFTLLFHTRFLFSLSSS*

>peptide 9 (53 aa)
MSTTGRGWHSVLGIFKGRRGRTGHHAKCGALPAAGPYLRLSRFQGGQAVKQKR*

Sequence

>CNT30519028
CACAGGTCGTTCTGCTGGGCAGGTATCGACAATGATCCTTCCGCAGGTTCACCTACGGAAACCTTGTTTCGACTTCTCCTTCCTCTAAATGATAAGGTTC
AGTGGACTTCTCGCGACGTTGCCGGCAGCGAACCGCCCACATCGCCTCGATCCGAACACTTCACCGGACCATTCAATCGGTGGGAGCGACGGGCGGTGTG
TACAAAGGGCAGGGACGTAGTCAACGCGAGCTGATGACTCGCGCTTACTAGGAATTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA
TGAAATTTCAAAGATTACCCGGGCCTGTCGGCCAAGGCTATAAACTCGCCACGCTTTCACGGTTCGTATTCGTACTGGAAATCAGAATCAAACGAGCTTT
TACCCTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCAC
CTGACAATGTCTTCCGCCCGGATCGGCCCGCCGAAACGAGCCTTGGGTCCAAAAAGAGGGGCAATGCCCCGCCTCCGATTCACGGAATAAGTAAAATAAC
GTTAAAAGTAGTGGTATTTCACTTTCGCCTTTCGGCTCCCACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG
TCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGC
GTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCA
GAGCACTGGGCAGAAATCACATTGCGTGAGCATCCGCAGGGACCATCGCAATGCTTTGTTTTAATTAAACAGTCGGATTCCCCTTGTCCGTACCAGTTCT
GAGTCGACTGTTCGACGCCCGGGGAAGACCGCCGAAGCGATCGTTCCCAGTCCGTCCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGGAGCAGCT
CGAGCAGTCCACCGACAGCCGACGGGTTCGGGACTGGGACCCCCGTGCCCAGCCCTCAGAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGAC
TTCCCTTGCCTACATTGTTCCATCGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGGATGGCACTCGGTCCTCCGG
ATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCACGCGAAGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTGAGCCGTTTCCAGGGTGGGC
AGGCTGTTAAACAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGACGTCTCCGGACTCCCTAACGTTGCCGTCAGCCGCCACGTCCCGGTTCAGGAATTT
TAACCCGATTCCCTTTCGAAGCTCGCGTGCAGCACGCTATCAGACGGGCTTCCCCCGTCTCTTAGGATCGACTAACCCATGTGCAAGTGCCGTTCACATG
GAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGCTCCGCCCGGGCTCGCGCCCCAG
GTTTTGCAGCGACCGCCGCGCCCTCCTACTCATCGGGGCCTGGCACTTGCCCCGACGGCCGGGTATAGGTCGCGCGCTTCAGCGCCATCCATTTTCGGGG
CTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTTCCATGACCACCGTCCTGCTGTTCACCTTGGAGACCTGATGCGGTTATG
AGTACGACCGGGCGTGGATGGCACTCGGTCCTCGGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCACGCGAAGTGCGGTGCTCTTCCAGCCGCTG
GACCCTACCTCCGGCTGAGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGACGTCTCCGGACTCCCTAAC
GTTGCCGTCAGCCGCCACGTCCCGGTTCAGGAATTTTAACCCGATTCCCCTTCGAAGCTCGCGTGCAGCACGCTATCAGACGGGCTTCCCCCGTCTCTTA
GGATCGACTAACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATC