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Detailed information on CNT30518041


BLAST search results

BLAST vs Swiss-Prot:
sp|Q84VT2|FAD12_PUNGR, E-value = 2e-83

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30670880Juglans regiaSetaria viridis16.8842.9985.8792forward
CNT30375708Juglans regiaArabidopsis thaliana44.0421.3581.25240forward
CNT30712784Juglans regiaGlycine max48.8135.783.83266forward
CNT30632979Juglans regiaCapsicum annuum32.4828.7380.79177forward
CNT30539975Juglans regiaBrassica napus41.2828.0979.56225forward
CNT30508441Juglans regiaSolanum lycopersicum24.7710.2280.74135forward
CNT30442203Juglans regiaAegilops tauschii20.5510.1783.93112forward
CNT30666984Juglans regiaTriticum dicoccoides20.5511.5384.82112forward
CNT30649933Juglans regiaRosa chinensis26.2465.383.92143forward
CNT30477457Juglans regiaArabidopsis halleri26.9744.4184.35147forward
CNT30364817Juglans regiaSorghum bicolor20.5514.9584.82112forward
CNT30424586Juglans regiaPapaver somniferum30.4618.7481.33166forward
CNT30705704Juglans regiaPrunus avium38.5310.3687.62210forward
CNT3031674Juglans regiaTheobroma cacao34.6852.7980.42189forward
CNT30323777Juglans regiaAsparagus officinalis16.8824.9388.0492forward
CNT3036618Juglans regiaCucumis melo25.1427.2982.48137forward
CNT30583774Juglans regiaEchinochloa crusgalli20.556.5685.71112forward

Expression of CNT30518041

Peptides detected in this lncRNA

>peptide 1 (59 aa)
MAPHKHIQAKYKGQPRMRVTKRVRTLPGGLLKYLEYHGILVLGLGTNTSSRSNDPVFEW*

>peptide 2 (44 aa)
MVMRHCREEMVSHMRVCDVVENLIQHPIISVCCCQCSLQPVPLR*

>peptide 3 (32 aa)
MLQVCDRYKKAIDYEQWHPINTYKPSTRANLE*

Sequence

>CNT30518041
TTGCTAGGGGCCCCCTCGTCCGGCTCAACATAAATGCACTCTTTAGCCTCCCTCCACATTGCTTTGTAAAATGATGTGCCATCAAACCGGTAGTACTCAC
CCAGTATTGGCTTGATTGCTTTGGTGGCCTCCATTGCATGGTAATGAGGCATTGTAGAGAAGAGATGGTGAGCCACATGCGTGTCTGTGATGTTGTGGAA
AACCTTATTCAGCACCCCATAATCTCTGTCTGCTGTTGCCAATGCTCCCTTCAGCCAGTCCCACTCCGATGAGTCGTAGTGTGGCAATGAAGGGTGAGTA
TGCTGCAAGTATGTGATCGTTACAAGAAAGCCATTGACTATGAGCAATGGCACCCCATAAACACATACAAGCCAAGTACAAGGGCCAACCTAGAATGAGA
GTGACCAAAAGAGTAAGGACCCTGCCTGGTGGGTTGTTGAAGTACTTGGAGTACCATGGCATTTTGGTTTTAGGCTTGGGAACAAACACTTCATCTCGCT
CTAACGACCCTGTGTTTGAGTGGTGACGACGGTGACTAATTTTCC